DN135103

Overview
NameDN135103
Unique NameDN135103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1053 contig Csv1_Contig1053:274..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_XENTR (Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.578e-20
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K++ ++L GI++QLG D+L +LRKLA+QF +Q  ++    P   E++DD+VPELV
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.578e-20
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K++ ++L GI++QLG D+L +LRKLA+QF +Q  ++    P   E++DD+VPELV
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_BOVIN (Transcription factor BTF3 homolog 4 OS=Bos taurus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.744e-19
Identity = 48/99 (48.48%), Postives = 72/99 (72.73%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++L GI++QLG D+L +LRKLA+QF +Q  ++ T  P   ++++D+VP+LV
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKTPKPEDIDEEEDDVPDLV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_PONAB (Transcription factor BTF3 homolog 4 OS=Pongo abelii GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.278e-19
Identity = 48/99 (48.48%), Postives = 71/99 (71.72%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++L GI++QLG D+L +LRKLA+QF +Q  ++    P   +++DD+VP+LV
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_MOUSE (Transcription factor BTF3 homolog 4 OS=Mus musculus GN=Btf3l4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.278e-19
Identity = 48/99 (48.48%), Postives = 71/99 (71.72%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++L GI++QLG D+L +LRKLA+QF +Q  ++    P   +++DD+VP+LV
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_HUMAN (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.278e-19
Identity = 48/99 (48.48%), Postives = 71/99 (71.72%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++L GI++QLG D+L +LRKLA+QF +Q  ++    P   +++DD+VP+LV
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BTF3_MOUSE (Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++L  I+NQLG D+L +LR+LA+   KQ+ + G     T EDDDDEVP+LV
Sbjct:   95 VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV 192          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BTF3_HUMAN (Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++L  I+NQLG D+L +LR+LA+   KQ+ + G     T EDDDDEVP+LV
Sbjct:   97 VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV 194          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 49/99 (49.49%), Postives = 71/99 (71.72%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            VN I   EEVN+ KDD  VI F NPKVQAS++ANT+ ++G  +TK+L ++L GI++QLG D+L +LRKLA+QF +Q  +         +++DD+VP+LV
Sbjct:   48 VNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNKAPKAEDIDEEDDDVPDLV 146          
BLAST of DN135103 vs. ExPASy Swiss-Prot
Match: NACB_ASPTN (Nascent polypeptide-associated complex subunit beta OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1
Query:    1 VNAIPXXEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILAGIINQLGPDNLDNLRKLADQFQKQAPNAGTGAPTTQEDDDDEVPELV 294
            V  IP  EEVN+FK+D  VI F NP+V AS+ +NT+ + G  + K+L +++ GI+NQLGPD+L +LRKLA+ +Q    N   GA   ++D++D++P+LV
Sbjct:   60 VQPIPAVEEVNMFKEDGNVIHFGNPRVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ-AGAEGKKDDEEDDIPDLV 157          
The following BLAST results are available for this feature:
BLAST of DN135103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
BT3L4_XENTR1.578e-2050.51Transcription factor BTF3 homolog 4 OS=Xenopus tro... [more]
BT3L4_XENLA1.578e-2050.51Transcription factor BTF3 homolog 4 OS=Xenopus lae... [more]
BT3L4_BOVIN1.744e-1948.48Transcription factor BTF3 homolog 4 OS=Bos taurus ... [more]
BT3L4_PONAB2.278e-1948.48Transcription factor BTF3 homolog 4 OS=Pongo abeli... [more]
BT3L4_MOUSE2.278e-1948.48Transcription factor BTF3 homolog 4 OS=Mus musculu... [more]
BT3L4_HUMAN2.278e-1948.48Transcription factor BTF3 homolog 4 OS=Homo sapien... [more]
BTF3_MOUSE3.886e-1952.53Transcription factor BTF3 OS=Mus musculus GN=Btf3 ... [more]
BTF3_HUMAN3.886e-1952.53Transcription factor BTF3 OS=Homo sapiens GN=BTF3 ... [more]
BT3L4_DANRE3.886e-1949.49Transcription factor BTF3 homolog 4 OS=Danio rerio... [more]
NACB_ASPTN5.611e-1846.46Nascent polypeptide-associated complex subunit bet... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionwca06c07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06c07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135103 ID=DN135103; Name=DN135103; organism=Citrus sinensis; type=EST; length=619bp
GTGAATGCTATTCCNNNNNNTGAGGAAGTTAACATTTTCAAGGATGACGT
CGTTATTCAGTTCTTAAATCCCAAAGTACAAGCTTCAATTGCTGCCAACA
CATGGGTAGTTAGTGGTGCCCCACAAACCAAGAAGTTGCAGGATATTCTC
GCTGGAATTATCAATCAATTGGGGCCAGATAATTTGGACAACCTGAGGAA
GTTGGCGGACCAGTTTCAGAAGCAAGCACCTAATGCAGGAACTGGTGCAC
CCACGACTCAAGAGGACGACGACGATGAGGTCCCAGAGCTTGTGGCAGGC
GAGACGTTTGAAGCTGCCGCAGAGGAGAAAACAGAGAAACCTGACGCTGC
TTCTTAGAGAGTTTTATCTAGAGGGACTTTGTGTTATTCTATATATTTTC
TATGTTTTTTGAGTTTTTATTTTACTTTTCCGAGTCAACTTTCTCTTGTT
TTATCTGATTCTCCCTGTGACACTAGATATTGTTACTTTTTAATTCAATG
TTTTGCTCCAGTGAAACCAGTGAAAACCCTTTTACTCTTTCAGAATCCAG
AGGCACTGTTGCAATGGCTTTCTATTGTGCATTTTGTTGTNAGTCTGATG
TTGTCGGATCGGTTGCTCT
back to top