DN135102

Overview
NameDN135102
Unique NameDN135102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7687 contig Csv1_Contig7687:209..798. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN135102 vs. ExPASy Swiss-Prot
Match: ASPL1_ARATH (Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.579e-30
Identity = 77/198 (38.89%), Postives = 108/198 (54.55%), Query Frame = 2 
Query:    5 PYQVXXFSDGTMSTGFLVEDVLHLATDEKQ-----SKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSL--RQTHPTYNITITQVSVGGNAV-NFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTS----DLPFEYCYVXS 562
            PY V   S  T S+G LVED+LHL  +        S SV +R+  GCG+ Q+G +LDG AP+GL GLG  + SVPS L+  GL+ NSFS+CF  + +GRI FGD G   Q  TPF       +  Y + +    +G + +    F+   DSG SFTYL +  Y ++     +L  ++   +TS     + +EYCY  S
Sbjct:  184 PYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQLDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKV-----ALEIDRHINATSKNFEGVSWEYCYESS 376
The following BLAST results are available for this feature:
BLAST of DN135102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASPL1_ARATH7.579e-3038.89Aspartic proteinase-like protein 1 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionwca06c06 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06c06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135102 ID=DN135102; Name=DN135102; organism=Citrus sinensis; type=EST; length=590bp
GGGTCCTTATCAAGTTNNNNATTTTTCTGATGGCACTATGTCGACTGGGT
TCTTGGTAGAGGATGTGTTGCACTTAGCCACAGATGAAAAGCAAAGTAAA
TCGGTTGATTCTCGGATTTCTTTCGGCTGTGGTCGGGTTCAGACTGGTTC
ATTCTTGGATGGTGCAGCTCCTAATGGTCTATTTGGGCTTGGGATGGACA
AGACTTCAGTTCCCAGCATATTAGCAAATCAAGGGCTAATTCCAAATTCC
TTTTCCATGTGTTTCGGATCTGATGGCACTGGGAGAATCAGCTTTGGAGA
TAAAGGAAGCCCAGGCCAAGGAGAAACACCGTTTTCCCTCAGGCAAACAC
ATCCAACTTACAATATCACCATCACTCAAGTTAGTGTTGGGGGTAATGCC
GTCAATTTTGAGTTTAGTGCAATTTTCGACTCCGGTACCTCATTTACATA
CTTGAACGACCCTGCATATACTCAAATTTCTGAGACTTTCAACTCACTGG
CCAAGGAAAAAAGAGAAACATCTACTTCCGATCTCCCTTTTGAATATTGT
TATGTANNGAGTCCAAATCAAACCAACTTNNNNNATCCTG
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