DN135090

Overview
NameDN135090
Unique NameDN135090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length397
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2579 contig Csv1_Contig2579:411..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.783e-23
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTCG 282
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +  CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.645e-18
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   94 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTCGS 285
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +  CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.148e-18
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTC 279
            MSD CGNCDCAD SQCVKKG+S   D VETD S++   VVM V AAE+   CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIED-VVMGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.850e-16
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTC 279
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE   NCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.850e-16
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTCG 282
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE +  CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.223e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTCG 282
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E    CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.223e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTCG 282
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E    CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.549e-13
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTCG 282
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S     +  +V   E +  CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135090 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.349e-12
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAESNCKCGPTCACVNCTCG 282
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +  CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA3.783e-2368.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC1.645e-1859.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE2.148e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV5.850e-1656.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO5.850e-1657.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ2.223e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI2.223e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ3.549e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.349e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca06a10 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06a10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135090 ID=DN135090|Name=DN135090|organism=Citrus sinensis|type=EST|length=397bp
GGGGACAGCAAAGCANNNNAAGTTTCGTACAATAAAGAGCCCTCTATTTC
CAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCG
GCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGC
TATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGT
TGTCATGGACGTTCAGGCTGCTGAGGCTGAAAGTAACTGCAAGTGTGGCC
CCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAAC
ACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGG
TTAAGAATAATGTAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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