DN135062

Overview
NameDN135062
Unique NameDN135062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN135062_ssr42 microsatellite DN135062_ssr42:42..53. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9487 contig Csv1_Contig9487:303..969. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135062 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  222 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHAGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWS 665
            +++VCV  ASG   S LV RLL  GYTV A + +   + + ++  L     E  L +++AD  D  S   A++GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWS
Sbjct:    5 SESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKK-VKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWS 148          
BLAST of DN135062 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  222 TKTVCVMDASGHFASALVRRLLLRGYTVHAALHNHAGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWS 665
            +++VCV  ASG   S LV RLL  GYTV A + +   + + ++  L     E  L +++AD  D  S   A++GCSG+F+   P    S   E      T+    ++L+AC +  TV K+VFTSS   V    H+  P    +DE NWS
Sbjct:    5 SESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKK-VKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQ-KPV---YDESNWS 148          
BLAST of DN135062 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 50/147 (34.01%), Postives = 74/147 (50.34%), Query Frame = 3
Query:  228 TVCVMDASGHFASALVRRLLLRGYTVHAALHNHAGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWS 665
            TVCV  A+G   S LV RLL RGY VHA + +  G L+ ++  L     +  LK+++AD     S   A++GC G+F+   P    S   E      T+    +++ +C +  TV K+VFTSS   V    +      H +DE +WS
Sbjct:    8 TVCVTGAAGFIGSWLVMRLLERGYVVHATVRD-PGDLKKVKHLLELPKAQTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV----NGQEKQLHVYDESHWS 149          
BLAST of DN135062 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12
Identity = 51/148 (34.46%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  225 KTVCVMDASGHFASALVRRLLLRGYTVHAALHNHAGKLQCIEGELINYNEEKKLKVFQADPFDYHSLVNALKGCSGLFYSFEPPSDHSTYDELTAEVETM-AAHNVLEACAQTNTVDKVVFTSSLTAVVWSNHRDNPTSHDFDERNWS 665
            +TVCV  ASG   S LV RLL RGY V A + +  G L+ ++  L   N +  L +++AD  +  S  +A+ GC G+F+   P    S   E      T+     +++AC +  TV + VFTSS   V    H+ N     +DE +WS
Sbjct:    6 ETVCVTGASGFIGSWLVMRLLERGYFVRATVRD-PGNLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKNV----YDENDWS 148          
The following BLAST results are available for this feature:
BLAST of DN135062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
DFRA_PYRCO6.875e-1235.57Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MALDO6.875e-1235.57Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_GERHY6.875e-1234.01Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
DFRA_ARATH8.980e-1234.46Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionwca05f08 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05f08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135062 ID=DN135062; Name=DN135062; organism=Citrus sinensis; type=EST; length=667bp
GAGGCTCTTTTCTCTTAACAATAAATACCTGTACAACCCCCCCCTCCCTC
CCTCCATCCTGTCTTCCTCTTCAAACAAAATCTCAACTCTTCCTTCTCCT
TCTTGAATTAATTGGAAATTACTTAAATCTCCCTCTCCTCCCAAAAATGG
CGCCACCAGCATCATCCGGTATTGAAGAAGAAATTGCAGTTGATCGAGAC
GGTTATGATTCTTCAAACGCAACAAAGACAGTATGCGTAATGGACGCCTC
TGGCCACTTTGCCTCCGCCCTCGTCCGCCGTCTCTTGCTTAGAGGCTACA
CCGTCCACGCTGCCCTCCACAACCACGCAGGAAAATTGCAGTGTATCGAA
GGAGAGTTAATTAATTACAACGAGGAGAAGAAATTGAAAGTTTTCCAGGC
AGACCCCTTTGATTACCACAGCCTCGTGAATGCTTTAAAGGGTTGCTCCG
GTCTGTTCTACTCCTTTGAGCCTCCCTCCGACCACTCCACCTACGATGAA
TTGACGGCGGAAGTAGAGACAATGGCAGCTCACAACGTGCTGGAAGCGTG
CGCACAGACAAATACAGTTGACAAAGTCGTCTTCACGTCTTCTCTAACCG
CCGTCGTCTGGAGTAACCACCGCGACAATCCGACGTCGCACGACTTCGAT
GAGCGAAATTGGAGTGA
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