DN134959

Overview
NameDN134959
Unique NameDN134959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1951 contig Csv1_Contig1951:28..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134959 vs. ExPASy Swiss-Prot
Match: QCR9_SOLTU (Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.113e-23
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   86 MEYTTKRSQGGLLEGLYRVIMRRNSIYVTFIIAGAFAGERAVDYGVRKIWEHNNVGKRYEDIPVLGQRQSEE 301
            ME   +RS GG+LEG YR++MRR  +YVTF+IAGA  GERAVDYGV+ +WE NNVGKRYEDI VLGQR  +E
Sbjct:    1 MESAARRSGGGVLEGFYRLVMRRTPVYVTFVIAGALLGERAVDYGVKTLWEKNNVGKRYEDISVLGQRPVDE 72          
The following BLAST results are available for this feature:
BLAST of DN134959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR9_SOLTU7.113e-2368.06Cytochrome b-c1 complex subunit 9 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionwca03h12 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03h12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134959 ID=DN134959; Name=DN134959; organism=Citrus sinensis; type=EST; length=599bp
GGGGGTCGAGATCTCTCTGCGAACCCTAAATCAACCACTGTATTACAGAT
CAATCAGAGCGACTCGAATTCCTGAGCGAACAGCCATGGAGTATACAACC
AAACGAAGCCAAGGAGGCCTCCTCGAAGGTCTTTACAGAGTCATTATGCG
CCGCAACTCCATCTACGTAACCTTCATCATCGCCGGTGCTTTCGCTGGTG
AACGGGCTGTGGATTATGGGGTTCGCAAAATCTGGGAGCACAACAATGTC
GGGAAACGATATGAAGACATTCCAGTTTTGGGGCAAAGGCAATCAGAAGA
GTAGTACCTCTCCTGTTCATTCTGAAGTTTTATATAAAAAATTTGGAAGG
GGCGTCCAATGTAATGGATCGCTGTTTTATGTTGCAATAAATTTTTTGTA
TGCTTGAGTGCATCGGACGTGTTTTTCAAGCTTGGTTTCAATCAAATAGG
CTTTGGAGCTATTGAATTGATGTGAATTGCGTATTGCTTCGACTATTTGT
CCGAGAACGTGTTCTTGCACTTGTTCAGTTTATAAAACATTAATTTGAAT
TGTATCCCATTTTGTTTTCCAAAANNAAAAAAAAAAAAAAAAAAAAAAA
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