DN134947

Overview
NameDN134947
Unique NameDN134947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length399
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2579 contig Csv1_Contig2579:413..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.295e-23
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 279
            MSDTCGNCDCAD++QCV+KGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   91 TCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 282
            TCGNCDC D+SQCV+KG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.254e-18
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 276
            MSD CGNCDCAD SQCV+KG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.003e-16
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 276
            MS  C NCDC+D SQC +KG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.416e-16
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 279
            MS  C NCDCAD +QCV+KG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.298e-15
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 279
            MSD CGNCDCAD+SQCV+KG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.298e-15
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 279
            MSD CGNCDCAD+SQCV+KG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.215e-13
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 279
            MSD CGNCDCAD+SQCV+KG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN134947 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.617e-13
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   82 MSDTCGNCDCADRSQCVEKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 279
            MSD CG+CDCAD+SQCV+KG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN134947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.295e-2368.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC9.605e-1959.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.254e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV2.003e-1656.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO3.416e-1657.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.298e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.298e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.215e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI4.617e-1346.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca03g05 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03g05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134947 ID=DN134947; Name=DN134947; organism=Citrus sinensis; type=EST; length=399bp
CACAGCAAAGCAAAGCATGTTTCGTACAATAAAGAGCCCTCTATTTCCAG
TTTTAAATTCCAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGCA
ACTGCGACTGCGCTGACAGGAGCCAGTGTGTGGAGAAGGGAAGCAGCTAT
GCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTGT
CATGGACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCGGCCCCA
CCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACACA
TGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTTA
AGAATAATGTAGGGGTGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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