EY662332

Overview
NameEY662332
Unique NameEY662332
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY662332_ssr218 microsatellite EY662332_ssr218:218..229. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1984 contig Csv1_Contig1984:294..870. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.559e-53
Identity = 106/183 (57.92%), Postives = 137/183 (74.86%), Query Frame = 2
Query:   29 AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPAS 577
            A RL +N   +G +L+NGRK  L++GT+AYVTQDD LI TLTV E ++YSA+++LPD M + +K+   E TI EMGLQD  +T IG W  +G+SGG+KRRVSI +E+L RP+LLFLDEPTSGLDSA++++V   +  L +       RT+IASIHQPSSEVF+LF  L LLS G+TVYFG AS
Sbjct:  101 ASRLAANAFLSGTVLLNGRKTKLSFGTAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSR-----DGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQAS 278          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 9.073e-49
Identity = 99/182 (54.40%), Postives = 133/182 (73.08%), Query Frame = 2
Query:   29 AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            AGRL  N    G +L+NG+K  L YG  AYVTQ+D L+ TLTV E + YSA L+LP  M+K +  +  E TI E+GLQD  +  IG W A+G+SGG+++RVSI +E+LTRP++LFLDEPTSGLDSA++++V+  +  +  RD     RT+I+S+HQPSSEVF LF +L LLSSG++VYFG A
Sbjct:   77 AGRLARNVVMTGNLLLNGKKARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI-ARD----GRTVISSVHQPSSEVFALFDDLFLLSSGESVYFGEA 253          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.881e-48
Identity = 92/182 (50.55%), Postives = 133/182 (73.08%), Query Frame = 2
Query:   29 AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            AGRL  N   +G++L+NG+KR L +G +AYVTQ+D L+ TLTV E++ YSA L+LP  +T+ +  +  E TI +MGL++  +  IG W  +G+SGG+K+R+SI +E+LT+P LLFLDEPTSGLDSA++++V+  +     R+     +T+++SIHQPS EVF LF +L LLS G+TVYFG A
Sbjct:   62 AGRLAGNVVMSGKVLVNGKKRRLDFGAAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQIL-----RNIASSGKTVVSSIHQPSGEVFALFDDLLLLSGGETVYFGEA 238          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.881e-48
Identity = 97/180 (53.89%), Postives = 132/180 (73.33%), Query Frame = 2
Query:   29 AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFG 568
            AGRL  N    G +L+NG+K  L YG  AYVTQ+D L+ TLTV E + YSA L+L   +TK +  +  E TI E+GLQD  +  IG W ++G+SGG+++RVS+ +E+LTRP++LFLDEPTSGLDSA++++V+  +  +  RD   G RT+++SIHQPSSEVF LF +L LLSSG+TVYFG
Sbjct:   76 AGRLARNVIMTGNLLLNGKKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI-ARD---GGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYFG 251          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35
Identity = 75/173 (43.35%), Postives = 117/173 (67.63%), Query Frame = 2
Query:   59 AGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            +G++LING  R   +   S YV QDD ++ TLTV E + +SA L+LP TMT  +K ER  M I+E+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RT+I SIHQP   +F+LF +L LL+SG+ ++ GPA
Sbjct:  103 SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINMVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPA 270          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.661e-34
Identity = 74/173 (42.77%), Postives = 116/173 (67.05%), Query Frame = 2
Query:   59 AGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            +G++LING  R   +   S YV QDD ++ TLTV E + +SA L+LP TMT  +K ER    I+E+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RT+I SIHQP   +F+LF +L LL+SG+ ++ GPA
Sbjct:  102 SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPA 269          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.244e-34
Identity = 74/173 (42.77%), Postives = 116/173 (67.05%), Query Frame = 2
Query:   59 AGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            +G++LING  R   +   S YV QDD ++ TLTV E + +SA L+LP TMT  +K ER    I+E+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RT+I SIHQP   +F+LF +L LL+SG+ ++ GPA
Sbjct:  103 SGDVLINGALRPTNFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPA 270          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.077e-33
Identity = 74/173 (42.77%), Postives = 116/173 (67.05%), Query Frame = 2
Query:   59 AGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            +G++LING  +   +   S YV QDD ++ TLTV E + +SA L+LP TM   +K ER    IKE+GL+   ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RT+I SIHQP   +F+LF +L LL+SG+ V+ GPA
Sbjct:  102 SGDVLINGAPQPAHFKCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGKLVFHGPA 269          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 5.344e-33
Identity = 73/173 (42.20%), Postives = 115/173 (66.47%), Query Frame = 2
Query:   59 AGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            +G++LING  R   +   S YV QDD ++ TLTV E + +SA L+L  TMT  +K ER    I+E+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RT+I SIHQP   +F+LF +L LL+SG+ ++ GPA
Sbjct:  103 SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPA 270          
BLAST of EY662332 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.115e-33
Identity = 72/173 (41.62%), Postives = 115/173 (66.47%), Query Frame = 2
Query:   59 AGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTMIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPA 574
            +G++LING  +   +  +S YV QDD ++ TLTV E + +SA L+LP  M   +K ER    IKE+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RT+I SIHQP   +F+LF +L LL+SG+ ++ GPA
Sbjct:  102 SGDVLINGAPQPANFKCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPA 269          
The following BLAST results are available for this feature:
BLAST of EY662332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
AB11G_ARATH3.559e-5357.92ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH9.073e-4954.40ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB13G_ARATH5.881e-4850.55ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB12G_ARATH5.881e-4853.89ABC transporter G family member 12 OS=Arabidopsis ... [more]
ABCG2_PIG5.709e-3543.35ATP-binding cassette sub-family G member 2 OS=Sus ... [more]
ABCG2_BOVIN1.661e-3442.77ATP-binding cassette sub-family G member 2 OS=Bos ... [more]
ABCG2_MACMU8.244e-3442.77ATP-binding cassette sub-family G member 2 OS=Maca... [more]
ABCG2_MOUSE1.077e-3342.77ATP-binding cassette sub-family G member 2 OS=Mus ... [more]
ABCG2_HUMAN5.344e-3342.20ATP-binding cassette sub-family G member 2 OS=Homo... [more]
ABCG2_RAT9.115e-3341.62ATP-binding cassette sub-family G member 2 OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662332 ID=EY662332; Name=EY662332; organism=Citrus sinensis; type=EST; length=577bp
CCACGCGTCCGAGACATGCATGTACTTCGCAGGAAGACTAGGATCGAACA
CAAGGCAAGCAGGAGAAATTCTAATTAATGGGCGAAAACGGGCACTGGCT
TATGGAACCTCGGCATATGTGACACAAGATGACGCTTTGATCACTACACT
GACGGTTAGTGAAGCAGTGTACTACTCAGCTCAGCTGCAATTGCCGGACA
CGATGACCAAATTACAGAAGAAAGAAAGAGCAGAAATGACAATAAAAGAA
ATGGGGCTACAAGATGCCATGAATACAAGAATTGGAGGCTGGGGAGCTAA
AGGCCTTAGTGGTGGTCAAAAGAGGAGAGTTAGCATTTGCATTGAAATGT
TGACTCGACCAAAGCTTCTATTTCTTGACGAGCCAACAAGCGGACTTGAT
AGTGCTGCTTCATACTATGTAATGAGCAGGATTGCTAAGCTTGATCAAAG
AGATCATGGAGTGGGATCAAGAACAATGATAGCATCAATCCATCAACCTA
GCAGCGAAGTTTTTCAGCTTTTTCACAACCTTTGCCTTCTTTCTTCCGGT
CAAACTGTCTATTTTGGTCCAGCTTCT
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