EY662331

Overview
NameEY662331
Unique NameEY662331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12715 contig Csv1_Contig12715:164..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662331 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.963e-53
Identity = 71/124 (57.26%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  208 SASDATRVSILLGLFKLIMTGLAXXXXXXXXXXXXXXXXXXXIVIXXXXXXXXXXXXXXVPXXXXXXXXXYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 579
            +A DATRVSILLGL KLIMTG+A                   +V+               P         YVGCYQLSFGPIGWLMISE+FPL+LRGRGLS+AVLVNFGANALVTFAFSPLK+L
Sbjct:  339 AAGDATRVSILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPVVAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKEL 462          

HSP 2 Score: 98.2117 bits (243), Expect = 7.963e-53
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   23 SAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ 211
            SA  +V+EIL EL++VGEDKEV+  E+F GKCLKALIIG GLVLFQQITGQPSVLYYA SILQ
Sbjct:  271 SAAEQVNEILAELTFVGEDKEVTFGELFQGKCLKALIIGGGLVLFQQITGQPSVLYYAPSILQ 333          
BLAST of EY662331 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.128e-51
Identity = 69/124 (55.65%), Postives = 81/124 (65.32%), Query Frame = 1
Query:  208 SASDATRVSILLGLFKLIMTGLAXXXXXXXXXXXXXXXXXXXIVIXXXXXXXXXXXXXXVPXXXXXXXXXYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKDL 579
            +A+DATR+SILLGL KL+MTG++                   +VI              VP         YVGCYQLSFGPIGWLMISE+FPL+LRGRG+S+AVLVNFGANALVTFAFSPLK+L
Sbjct:  339 AAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYMFYKNVPAVAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKEL 462          

HSP 2 Score: 93.9745 bits (232), Expect = 1.128e-51
Identity = 49/68 (72.06%), Postives = 53/68 (77.94%), Query Frame = 2
Query:    8 SAIGVSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ 211
            S I  SA  +V+EIL ELS VGEDKE +  E+F GKCLKAL I  GLVLFQQITGQPSVLYYA SILQ
Sbjct:  266 SVIADSAAEQVNEILAELSLVGEDKEATFGELFRGKCLKALTIAGGLVLFQQITGQPSVLYYAPSILQ 333          
BLAST of EY662331 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 3.213e-38
Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = 1
Query:  208 SASDATRVSILLGLFKLIMTGLAXXXXXXXXXXXXXXXXXXXIVIXXXXXXXXXXXXXXVPXXXXXXXXXYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSVAVLVNFGANALVTFAFSPLKD 576
            +A+DATRVS+++G+FKL+MT +A                   I +               P         YVGCYQ+SFGPI WLM+SE+FPLR RGRG+S+AVL NFG+NA+VTFAFSPLK+
Sbjct:  393 AAADATRVSVIIGVFKLLMTWVAVAKVDDLGRRPLLIGGVSGIALSLFLLSAYYKFLGGFPLVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE 515          

HSP 2 Score: 63.929 bits (154), Expect = 3.213e-38
Identity = 34/50 (68.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query:   62 SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ 211
            +Y  E    +  EVF G  LKAL IG GLVLFQQITGQPSVLYYA SILQ
Sbjct:  338 AYEDEKSGGNFLEVFQGPNLKALTIGGGLVLFQQITGQPSVLYYAGSILQ 387          
The following BLAST results are available for this feature:
BLAST of EY662331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
XYLL2_ARATH7.963e-5357.26D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]
XYLL1_ARATH1.128e-5155.65D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
XYLL3_ARATH3.213e-3847.15D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-A03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662331 ID=EY662331; Name=EY662331; organism=Citrus sinensis; type=EST; length=580bp
CCACGCGTCCGCTATTGGTGTCTCTGCTCCTACAGAAGTGGATGAGATTC
TTACAGAGCTCTCTTATGTTGGAGAAGACAAAGAAGTTTCACTAAGGGAA
GTATTCCATGGAAAATGCTTGAAGGCCCTTATAATTGGTGCAGGATTAGT
TTTGTTTCAACAGATCACTGGGCAACCAAGTGTATTGTACTATGCTGCAT
CAATCCTTCAGCCTCTGATGCAACACGGGTCTCAATTTTACTCGGCCTAT
TCAAGTTGATTATGACTGGATTGGCTGTTCTTGTTGTTGAGAGACTTGGA
AGGAGACCTTTACTACTTGGTGGTGTTTCTGGGATTGTTATCTCTTTATT
CCTTTTGGGATCATATTACCTCTTCTTGGATGATGTGCCTGCTGTGGCTG
TTGTTGCGTTGTTGTTGTATGTTGGTTGTTATCAGTTATCCTTTGGGCCT
ATTGGTTGGCTGATGATTTCAGAGGTATTTCCACTTCGTCTAAGAGGGCG
GGGACTTAGTGTAGCAGTTCTAGTGAACTTCGGAGCAAATGCACTTGTGA
CATTTGCATTTTCCCCACTGAAGGACCTGC
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