DN134858

Overview
NameDN134858
Unique NameDN134858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5436 contig Csv1_Contig5436:300..938. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH_SYNY3 (Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=lpdA PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.432e-27
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query:    7 EPQAREKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 306
            E QA+E  EKEGF VS  KT FK N+KALAE E +G+AK++YR D GE+LG HI G+HA+DLI EA+ AIA    ++++ F VHA PTLSEVLDE +K A
Sbjct:  374 EAQAKELGEKEGFVVSTAKTYFKGNSKALAEKETDGIAKVVYRQDTGELLGAHIIGIHASDLIQEAAQAIADRKSVRELAFHVHAHPTLSEVLDEAYKRA 473          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH1_BACST (Dihydrolipoyl dehydrogenase OS=Bacillus stearothermophilus GN=pdhD PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.840e-13
Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = 1
Query:   22 EKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 306
            ++A+ EG +V   K  F AN +ALA N+ +G  KL+ R ++G I+G  I G +A+D+I E   AI  G   +DI   +HA PTL E+  E  + A
Sbjct:  366 QQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVA 460          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH1_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=pdhD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.301e-12
Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   25 KAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 306
            +A++EG ++   K  F AN +AL+ NE +G  KLI R ++G ++G  I G  A+D+I E S AI  G   +DI   +HA PTL E+  E  + A
Sbjct:  368 QAKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVA 461          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH_PEA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 1
Query:   13 QAREKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDE 291
            +  E+ ++ G E  V K  F AN++A A +  EGL K+I   +  +ILGVHI   +A +LIHEA+ A+      +DI    HA PT+SE + E
Sbjct:  397 KTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKE 489          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 1
Query:   13 QAREKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDE 291
            +  E+ +KEG    V K  F AN++A A +  EGL K++   +  +ILGVHI   +A +LIHEA  AI      +DI    HA PT+SE L E
Sbjct:  403 KTEEQLKKEGVSYRVGKFPFMANSRAKAIDNAEGLVKILADKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 495          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH2_ARATH (Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=LPD2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.879e-11
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 1
Query:   13 QAREKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDE 291
            +  E+ +KEG   +V K  F AN++A A +  EG+ K++   +  +ILGVHI   +A +LIHEA  AI      +DI    HA PT+SE + E
Sbjct:  403 KTEEQLKKEGVSYNVGKFPFMANSRAKAIDTAEGMVKILADKETDKILGVHIMSPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAIKE 495          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH2_HALMA (Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marismortui GN=lpdA2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.466e-11
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 1
Query:   25 KAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAAK 309
            +AE  GFE  + +   +AN +AL  NE EG  +++   D   +LG  I G  A++LI E    I +G R++DI   +H  PTLSE + E   AA+
Sbjct:  371 EAEAAGFEPVIGQMPVRANGRALTVNEKEGFVRVVADADEEFLLGAQIVGPEASELIAELGLGIEMGARLEDIAGTIHTHPTLSEAVHEAAAAAR 465          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH_PIG (Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus scrofa GN=DLD PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 35/98 (35.71%), Postives = 55/98 (56.12%), Query Frame = 1
Query:   13 QAREKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 306
            ++ E+ ++EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++I+EA+ A+  G   +DI    HA PTLSE   E   AA
Sbjct:  404 KSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHIIGPGAGEMINEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH_MACFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = 1
Query:   13 QAREKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 306
            ++ E+ ++EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HA PTLSE   E   AA
Sbjct:  404 KSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of DN134858 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = 1
Query:   13 QAREKAEKEGFEVSVVKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHARPTLSEVLDEPFKAA 306
            ++ E+ ++EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HA PTLSE   E   AA
Sbjct:  404 KSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
The following BLAST results are available for this feature:
BLAST of DN134858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DLDH_SYNY31.432e-2760.00Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (... [more]
DLDH1_BACST5.840e-1340.00Dihydrolipoyl dehydrogenase OS=Bacillus stearother... [more]
DLDH1_BACSU1.301e-1240.43Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_PEA8.433e-1239.78Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisu... [more]
DLDH1_ARATH8.433e-1241.94Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]
DLDH2_ARATH1.879e-1139.78Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Ar... [more]
DLDH2_HALMA5.466e-1137.89Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marism... [more]
DLDH_PIG7.139e-1135.71Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus ... [more]
DLDH_MACFA9.324e-1134.69Dihydrolipoyl dehydrogenase, mitochondrial OS=Maca... [more]
DLDH_HUMAN9.324e-1134.69Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionwca02d05 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02d05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134858 ID=DN134858; Name=DN134858; organism=Citrus sinensis; type=EST; length=639bp
CCGGGCGAGCCTCAAGCAAGGGAAAAGGCTGAAAAGGAGGGATTTGAAGT
AAGTGTAGTGAAGACAAGCTTCAAAGCTAACACCAAGGCCTTAGCAGAAA
ACGAAGGGGAGGGACTTGCTAAGTTAATATACAGACCAGACAACGGTGAG
ATTCTTGGAGTTCATATCTTTGGGCTGCATGCTGCAGACCTTATCCATGA
AGCATCTAATGCTATTGCATTAGGCACACGTATTCAGGACATAAAATTTG
CGGTTCATGCACGTCCAACTCTCTCTGAAGTTCTAGACGAACCGTTTAAA
GCAGCAAAGGTTAAAGATCATGCTTCTAATCCAGTAAGTGAACCAGTTGC
AGTCTAAAGCATCTCAACACTTGGGAAATATTAAATTTTGAAGAAATTTG
CTTGTGCTAGGGAGTACCAAGGAATTTTGCATCCTCAGAGAGAACTAATC
AACACAGTGACCGTCCTAGCAAACCAAACCTGGTGAAGAAATTTGCTGAT
GTTTATATGACATTTGTATCCTGGTTTCTCTGCCTTGTGTATGCTTTGCA
GAAGTACTAATATTCATAATAGTTTCTAATTGGAAAATTATTTTCTGCTT
TCAATCCTGGACAATATTGCTGGAAATAAGAGGTTTTGT
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