DN134805

Overview
NameDN134805
Unique NameDN134805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length361
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:134..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.944e-23
Identity = 46/66 (69.70%), Postives = 53/66 (80.30%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 272
            MSDTCGNCDCAD +QCVKKGSSY AD +ET+ S +   VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIM--TVVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.400e-19
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTC 269
            MSD CGNCDCAD SQCVKKG+S   D VETD S++   VVM V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIED-VVMGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.280e-18
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 3
Query:   84 TCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 275
            TCGNCDC D SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.198e-16
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTC 269
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.198e-16
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 272
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.730e-15
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 272
            MSD CGNCDCAD SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.730e-15
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 272
            MSD CGNCDCAD SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.762e-13
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 272
            MSD CGNCDCAD SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN134805 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.050e-12
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   75 MSDTCGNCDCADGSQCVKKGSSYAADFVETDLSFVXTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 272
            MSD CG+CDCAD SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN134805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA2.944e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_ACTDE4.400e-1967.69Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MUSAC1.280e-1860.94Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_PRUAV1.198e-1658.46Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO1.198e-1659.09Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.730e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.730e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ2.762e-1350.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.050e-1248.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca01e05 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01e05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134805 ID=DN134805; Name=DN134805; organism=Citrus sinensis; type=EST; length=361bp
AAAGCAAAGCAAGTTTCGTNNATAAAGAGCCCTCTATTTCCAGTTTTAAT
TTCTAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGCAACTGCGA
CTGCGCTGACGGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTATGCTGCTG
ACTTCGTCGAGACTGACTTGAGCTTTGTCNNNACCGTTGTTGTCATGGAC
GTTCAGGCTGCTGAGGCTGAAGGTAACTGCAAGTGCGGCCCCACCTGCGC
TTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACACATGCAGCA
AAAAATAAGAACCTGCGGGTGTGCCAAAATATTGTGGGGGTTAAGAATAA
TGTATGGGCTT
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