DN134801

Overview
NameDN134801
Unique NameDN134801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134801 vs. ExPASy Swiss-Prot
Match: BH091_ARATH (Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.668e-32
Identity = 67/96 (69.79%), Postives = 82/96 (85.42%), Query Frame = 1
Query:    4 LALKQNPSFVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDKLQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQYAAVPPTS 291
            L  K   + VDVRI+DDEVTIK+VQ+KKI+CLL VS+VLD+LQLDLHHVAGG IG++YSFLFNTKIYEGS++YA +IAN++IEV+DK Y A  P S
Sbjct:  331 LQRKSKVTEVDVRIVDDEVTIKVVQKKKINCLLLVSKVLDQLQLDLHHVAGGQIGEHYSFLFNTKIYEGSTIYASAIANRVIEVVDKHYMASLPNS 426          
BLAST of DN134801 vs. ExPASy Swiss-Prot
Match: BH010_ARATH (Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.663e-30
Identity = 65/96 (67.71%), Postives = 79/96 (82.29%), Query Frame = 1
Query:    4 LALKQNPSFVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDKLQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQYAAVPPTS 291
            L  K   + VDVRIIDDEVTIKLVQ+KKI+CLLF ++VLD+LQLDLHHVAGG IG++YSFLFNTKI EGS VYA  IA+ L+EV++KQY    P++
Sbjct:  361 LKRKSKVTEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVEKQYMEAVPSN 456          
BLAST of DN134801 vs. ExPASy Swiss-Prot
Match: BH089_ARATH (Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.256e-28
Identity = 61/89 (68.54%), Postives = 78/89 (87.64%), Query Frame = 1
Query:   10 LKQNPSF--VDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDKLQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQY 270
            LK+   F  VDVRIIDDEVTIK+VQ+KKI+CLLFVS+V+D+L+LDLHHVAG  IG+++SFLFN KI EGSSVYA +IA++++EV+ KQY
Sbjct:  316 LKRKSKFTDVDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEGSSVYASAIADRVMEVLKKQY 404          
The following BLAST results are available for this feature:
BLAST of DN134801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
BH091_ARATH1.668e-3269.79Transcription factor bHLH91 OS=Arabidopsis thalian... [more]
BH010_ARATH2.663e-3067.71Transcription factor bHLH10 OS=Arabidopsis thalian... [more]
BH089_ARATH3.256e-2868.54Transcription factor bHLH89 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionwca01d12 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01d12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134801 ID=DN134801; Name=DN134801; organism=Citrus sinensis; type=EST; length=525bp
CCTCTCGCTCTTAAACAAAATCCATCCTTCGTTGATGTTCGCATCATTGA
CGACGAAGTCACTATCAAACTCGTTCAGCGAAAGAAGATCGATTGTTTGT
TGTTTGTTTCCAGGGTTCTTGACAAGCTTCAGCTGGATCTCCACCATGTT
GCTGGTGGCCACATCGGCGATTACTATAGCTTTCTCTTCAACACCAAAAT
TTATGAAGGCTCTTCTGTTTATGCTGGTTCTATAGCCAACAAACTTATTG
AGGTCATGGACAAACAATATGCAGCAGTTCCACCAACTAGCTGTGCCTAT
TAGGATTGGAGAAGCCGAGAAGGCGATCGTCCTACTAATTAGAAATATCA
CGTGAGCTGAGCTGTTTAATATAACTGTTCATTTCTCTCTACCAGTCATA
TCACTATCTCAAATTTCTTTGTTTTGTGTTTTCTTTTTTGATATACATTT
CTAAGTATATAATATATAAATGCCTCAATTTGGGTATATTCAGATGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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