DN134792

Overview
NameDN134792
Unique NameDN134792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29
Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKFI 287
            L+VGFVTS+   N L +K L +GDVFVFPQGLIHFQ N+GK  A A++ L+SQ PG +TIADTVFG+NP IDP FL  AFQ+DPKIV DLQ KFI
Sbjct:  127 LFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQVDPKIVMDLQTKFI 220          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKFIN 290
            LYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P I+PD L +AFQLD  +VKDL+ KF N
Sbjct:  126 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKFIN 290
            LYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P I+PD L +AFQLD  +VKDL+ KF N
Sbjct:  126 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKFIN 290
            LYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P I+PD L +AFQLD  +VKDL+ KF N
Sbjct:  127 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 222          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29
Identity = 63/94 (67.02%), Postives = 77/94 (81.91%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKF 284
            L VGFVTS+  +N L  KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA TVFGANP+I+P+ L KAFQ+DP++V DLQ KF
Sbjct:  129 LLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKFIN 290
            LYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIAD VFG+ P I+PD L +AFQLD  +VKDL+ KF N
Sbjct:  126 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29
Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKF 284
            L VGFVTS+  +N L +KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA+TVFGANP+I+P  L KAFQL+P++V DLQ KF
Sbjct:  129 LLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.082e-28
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKFIN 290
            LYVGFV+S+Q NN L AKVL  GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P I+PD L +AFQLD  IVKDL+ KF N
Sbjct:  127 LYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLEAKFRN 222          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.479e-27
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKF 284
            LYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ NIGK  A A++ L+SQ  G +TIA+TVFG+NP I P+ L +AFQLD  +VK+LQ KF
Sbjct:  126 LYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219          
BLAST of DN134792 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.544e-27
Identity = 59/94 (62.77%), Postives = 74/94 (78.72%), Query Frame = 3
Query:    3 LYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSIDPDFLGKAFQLDPKIVKDLQNKF 284
            LYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ N+GK  A A++ L+SQ  G +TIA+TVFG+NP I P+ L +AFQLD  +VK+LQ KF
Sbjct:  126 LYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
The following BLAST results are available for this feature:
BLAST of DN134792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
GL19_ARATH1.669e-2967.37Putative germin-like protein subfamily 1 member 9 ... [more]
GL117_ARATH1.669e-2966.67Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH1.669e-2966.67Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL114_ARATH1.669e-2966.67Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL110_ARATH6.340e-2967.02Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL119_ARATH8.281e-2965.63Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL111_ARATH8.281e-2967.02Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL113_ARATH1.082e-2866.67Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL116_ARATH3.479e-2763.83Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL120_ARATH4.544e-2762.77Germin-like protein subfamily 1 member 20 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionwca01c12 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01c12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134792 ID=DN134792; Name=DN134792; organism=Citrus sinensis; type=EST; length=587bp
CTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTCATC
GCAAAAGTTCTAAATAAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGAT
TCACTTCCAATTCAACATTGGAAAAACAAATGCAGCTGCCTATTCTGCTC
TAAACAGCCAATTCCCGGGTGAAGTTACCATAGCCGACACAGTCTTTGGA
GCCAATCCTTCAATCGATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGA
CCCAAAGATAGTGAAAGACCTTCAAAATAAGTTCATTAATGGCAATTAGG
AGAAGGAATTAATGAGCTTTAATATAAATGGCCTCTTCACTAGTGGCTGT
ATTACTTTATCTCCAGATTATCATATCTTAATTAATGTAATAAAAGAGGT
CTCTCATGAACCTCTCTCCAGGCTGACTGTGGCCATGTAATAAACATAAT
TGTTATTGTTTTTATTTAGCAGCTAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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