DN134784

Overview
NameDN134784
Unique NameDN134784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12825 contig Csv1_Contig12825:286..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A112_ARATH (Probable aminotransferase ACS12 OS=Arabidopsis thaliana GN=ACS12 PE=2 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.103e-61
Identity = 109/168 (64.88%), Postives = 139/168 (82.74%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 515
            RVHIIYGLSKDLS+PGFR GVIYS++E V+ AAKKL RF S+    QR+LIS+LSD +FI+ Y+  +++RI+  +  FV GLK LGI C+ES  GLYCW DMS L+ SYSEKGELEL++KLL +AKIN TPG+AC+CIEPGWFRCCFT+L  EDIP+++ERI+++AE+
Sbjct:  325 RVHIIYGLSKDLSIPGFRAGVIYSFHEDVVNAAKKLMRFSSVPVLVQRILISLLSDVRFIEGYMAAHRQRIRDKHIRFVEGLKQLGIPCAESGGGLYCWVDMSSLLTSYSEKGELELFEKLLTVAKINATPGTACYCIEPGWFRCCFTALADEDIPVIMERIRQLAES 492          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A110_ARATH (Probable aminotransferase ACS10 OS=Arabidopsis thaliana GN=ACS10 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.149e-61
Identity = 105/170 (61.76%), Postives = 135/170 (79.41%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 521
            RVHI+Y LSKDLS  G R+  IYS+NESVL+A++KLT    +S+PTQ LLIS +S+ K +Q +++TN++R++ +Y   V GLK LGI C+ S+ G YCWADM GLI SYSEKGE+ELW+KLLNI KINV PGS CHCIEPGWFR CF++L+  D+P+V+ RI+KV ETCK
Sbjct:  385 RVHIVYDLSKDLSFRGLRSAAIYSFNESVLSASRKLTTLSPVSSPTQHLLISAISNPKNVQRFVKTNRQRLQSIYTELVEGLKELGIECTRSNGGFYCWADMRGLISSYSEKGEIELWNKLLNIGKINVIPGSCCHCIEPGWFRICFSNLSERDVPVVMNRIRKVCETCK 554          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A17_ARATH (1-aminocyclopropane-1-carboxylate synthase 7 OS=Arabidopsis thaliana GN=ACS7 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.183e-45
Identity = 75/164 (45.73%), Postives = 117/164 (71.34%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQK 503
            RVHI+Y LSKDL LPGFR G IYSYN++V+  A++++ F  +S+ TQ +L SMLSD +F ++Y+  N+ R+++ YD+ V GLK  GI C + +AGL+CW ++  L+   ++ GEL+LWD +L    +N++PGS+CHC E GWFR CF +++   + + ++RI +
Sbjct:  276 RVHIVYSLSKDLGLPGFRVGTIYSYNDNVVRTARRMSSFTLVSSQTQHMLASMLSDEEFTEKYIRINRERLRRRYDTIVEGLKKAGIECLKGNAGLFCWMNLGFLLEKKTKDGELQLWDVILKELNLNISPGSSCHCSEVGWFRVCFANMSENTLEIALKRIHE 439          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A15_ARATH (1-aminocyclopropane-1-carboxylate synthase 5 OS=Arabidopsis thaliana GN=ACS5 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.183e-45
Identity = 83/183 (45.36%), Postives = 126/183 (68.85%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET--CK*MLRGISYVRL 554
            RVH++Y LSKDL LPGFR G IYS +E +++AA K++ F  +S+ TQ LL ++LSD KF  +YLE N++R+K      V+GL+  GI C  S+AGL+CW DM  L+ + + + EL+LW K++   K+N++PGS+CHC EPGWFR CF +++ + + L ++R++   E+  C  M+   S+ RL
Sbjct:  263 RVHVVYSLSKDLGLPGFRVGAIYSNDEMIVSAATKMSSFGLVSSQTQYLLSALLSDKKFTSQYLEENQKRLKSRQRRLVSGLESAGITCLRSNAGLFCWVDMRHLLDTNTFEAELDLWKKIVYNVKLNISPGSSCHCTEPGWFRVCFANMSEDTLDLALKRLKTFVESTDCGRMISRSSHERL 445          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A13_SOLLC (1-aminocyclopropane-1-carboxylate synthase 3 OS=Solanum lycopersicum GN=ACS3 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.225e-44
Identity = 82/168 (48.81%), Postives = 117/168 (69.64%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 515
            RVHI+Y LSKDL LPGFR G IYS +E V++AA K++ F  +S+ TQ LL  MLSD KF ++Y+  N++R+KK +   V GLK  GI C ES+AGL+CW DM  L+ S +   E++LW K++    +N++PGS+CHC EPGWFR CF +++ + + L + RI+   E+
Sbjct:  263 RVHIVYSLSKDLGLPGFRIGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSCMLSDKKFTKKYISENQKRLKKRHAMLVKGLKSAGINCLESNAGLFCWVDMRHLLSSNNFDAEMDLWKKIVYDVGLNISPGSSCHCTEPGWFRVCFANMSEDTLDLAMRRIKDFVES 430          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A18_ARATH (1-aminocyclopropane-1-carboxylate synthase 8 OS=Arabidopsis thaliana GN=ACS8 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.600e-44
Identity = 81/167 (48.50%), Postives = 120/167 (71.86%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 512
            RVHI+Y LSKDL LPGFR GVIYS ++ V++AA K++ F  IS+ TQ LL ++LSD  F + YLE N+ R+K  +   V+GL+  GI C +S+AGL+CW DM  L+ S + + E+ELW K++   K+N++PGS+CHC EPGWFR CF +L+ E + + ++R+++  +
Sbjct:  263 RVHIVYSLSKDLGLPGFRVGVIYSNDDFVVSAATKMSSFGLISSQTQYLLSALLSDKTFTKNYLEENQIRLKNRHKKLVSGLEAAGIECLKSNAGLFCWVDMRHLLKSNTFEAEIELWKKIVYEVKLNISPGSSCHCNEPGWFRVCFANLSEETLKVALDRLKRFVD 429          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A19_ARATH (1-aminocyclopropane-1-carboxylate synthase 9 OS=Arabidopsis thaliana GN=ACS9 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.729e-44
Identity = 80/168 (47.62%), Postives = 120/168 (71.43%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 515
            RVHI+Y LSKDL LPGFR G IYS +E V++AA K++ F  +S+ TQ LL ++LSD KF   YL+ N++R+K      V+GL+  GI C +S+AGL+CW DM  L+ + + + ELELW K++   K+N++PGS+CHC EPGWFR CF +++ + + L ++R+++  E+
Sbjct:  263 RVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTSTYLDENQKRLKIRQKKLVSGLEAAGITCLKSNAGLFCWVDMRHLLDTNTFEAELELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLDLAMKRLKEYVES 430          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A11_ORYSJ (1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. japonica GN=ACC1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.565e-44
Identity = 80/168 (47.62%), Postives = 119/168 (70.83%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 515
            RVH++Y LSKDL LPGFR G IYS N +V++AA K++ F  +S+ TQ LL ++L D  F + Y+  NKRRIK+ +D  V GL+ +GI C  S+AGL+CW DMS L+ S S  GE+ELW K++    +N++PGS+CHC EPGWFR CF +++ + + + ++R++   ++
Sbjct:  277 RVHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLDVAMQRLRSFVDS 444          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A11_ORYSI (1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. indica GN=ACC1 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 3.565e-44
Identity = 80/168 (47.62%), Postives = 119/168 (70.83%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 515
            RVH++Y LSKDL LPGFR G IYS N +V++AA K++ F  +S+ TQ LL ++L D  F + Y+  NKRRIK+ +D  V GL+ +GI C  S+AGL+CW DMS L+ S S  GE+ELW K++    +N++PGS+CHC EPGWFR CF +++ + + + ++R++   ++
Sbjct:  277 RVHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLDVAMQRLRSFVDS 444          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A111_ARATH (1-aminocyclopropane-1-carboxylate synthase 11 OS=Arabidopsis thaliana GN=ACS11 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 77/164 (46.95%), Postives = 118/164 (71.95%), Query Frame = 3
Query:    9 GRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            G++H++Y LSKDL LPGFR G+IYS NE V++AA K++ F  IS+ TQ LL ++LSD +F   YLE NK+R+++  D  V+GLK  GI C +S+AGL+CW D+  L+ S + + E  LW K++    +N++PGS+CHC EPGWFR CF +++ + + + ++R++
Sbjct:  257 GKIHVVYSLSKDLGLPGFRVGLIYSNNEKVVSAATKMSSFGLISSQTQHLLANLLSDERFTTNYLEENKKRLRERKDRLVSGLKEAGISCLKSNAGLFCWVDLRHLLKSNTFEAEHSLWTKIVCEVGLNISPGSSCHCDEPGWFRVCFANMSDQTMEVAMDRVK 420          
The following BLAST results are available for this feature:
BLAST of DN134784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
1A112_ARATH1.103e-6164.88Probable aminotransferase ACS12 OS=Arabidopsis tha... [more]
1A110_ARATH7.149e-6161.76Probable aminotransferase ACS10 OS=Arabidopsis tha... [more]
1A17_ARATH7.183e-4545.731-aminocyclopropane-1-carboxylate synthase 7 OS=Ar... [more]
1A15_ARATH7.183e-4545.361-aminocyclopropane-1-carboxylate synthase 5 OS=Ar... [more]
1A13_SOLLC1.225e-4448.811-aminocyclopropane-1-carboxylate synthase 3 OS=So... [more]
1A18_ARATH1.600e-4448.501-aminocyclopropane-1-carboxylate synthase 8 OS=Ar... [more]
1A19_ARATH2.729e-4447.621-aminocyclopropane-1-carboxylate synthase 9 OS=Ar... [more]
1A11_ORYSJ3.565e-4447.621-aminocyclopropane-1-carboxylate synthase 1 OS=Or... [more]
1A11_ORYSI3.565e-4447.621-aminocyclopropane-1-carboxylate synthase 1 OS=Or... [more]
1A111_ARATH1.037e-4346.951-aminocyclopropane-1-carboxylate synthase 11 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionwca01c03 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01c03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134784 ID=DN134784; Name=DN134784; organism=Citrus sinensis; type=EST; length=626bp
TACGGCCGGGTAGAGTTCATATAATATACGGGTTGTCGAAAGACCTCTCT
CTTCCGGGATTTAGGACCGGGGTTATCTATTCCTATAATGAGAGTGTTTT
GGCCGCTGCCAAAAAATTAACAAGATTTTGTTCTATTTCAGCCCCCACTC
AGAGGCTCCTAATTTCCATGCTCTCAGATACAAAGTTCATCCAGGAATAT
TTAGAGACCAATAAAAGGAGGATAAAGAAACTGTATGATTCATTTGTGGC
AGGTTTGAAATAATTAGGAATCAGGTGCTCAGAGAGCAGTGCTGGCTTAT
ATTGCTGGGCTGATATGAGTGGACTAATCCCCTCTTACAGTGAGAAAGGG
GAACTTGAATTATGGGATAAGCTCTTGAACATTGCTAAGATCAATGTTAC
TCCTGGCTCGGCCTGCCACTGTATAGAACCGGGATGGTTCCGGTGTTGTT
TTACTTCTTTAACCCACGAGGATATCCCTTTAGTCATTGAAAGGATCCAA
AAAGTTGCTGAAACTTGTAAATAAATGCTGAGAGGAATTTCATATGTAAG
ATTATTGCCATCATTAATGTTTTGGGAAAATTATGGGGACATGCACTGCT
TCTTAATTGAACAAAGGTCTAGTTCA
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