DC900468

Overview
NameDC900468
Unique NameDC900468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length261
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.985e-15
Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 2
Query:   35 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSSLTDN*KVI 256
            Q+ HFVLVHG   GAW WYK++ L+E++G+KV+ ++L  AG +P   + IH F DY++PLM+ M+S+  + KV+
Sbjct:    9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVV 82          
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.651e-15
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   44 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSSLTDN*KVI 256
            HFV VHG S GAWCWYK+  L+  +G+K + ++L GAG + +D+N +  FD YN+PL   +S L  + K++
Sbjct:   13 HFVFVHGASHGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIV 83          
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.630e-14
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 2
Query:   44 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSSLTDN*KVI 256
            HFV VHG S GAWCWYK+  L++ +G+K + ++L GAG    D+N +   D YN+PL   +S L  + KVI
Sbjct:   12 HFVFVHGASHGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVI 82          
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.387e-12
Identity = 29/71 (40.85%), Postives = 47/71 (66.20%), Query Frame = 2
Query:   44 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSSLTDN*KVI 256
            HFVL+H I  GAW W+K++  +E +G+KV+ +++  +G DP     I+ FD+Y++PL+ F+  L    KVI
Sbjct:    5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVI 75          
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.387e-12
Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 2
Query:   44 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSSLTDN*KVI 256
            HFVL+H I  GAW W+K++ L+E  G+KV+ ++L  +G DP     I  FD+Y++PL+ F+ +L    KVI
Sbjct:    5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVI 75          
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.989e-12
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 2
Query:   47 FVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSSLTDN*KVI 256
            FVLVHG   GAWCWYK+   +E SG     ++L G G + +D N +   ++Y+KPL+D + +L +  KVI
Sbjct:   98 FVLVHGEGFGAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVI 167          
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.826e-11
Identity = 22/65 (33.85%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   38 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSS 232
            K HF+LVHG+  GAWCWY+V   +  +G++ + +++  +G  P+  + +  F++Y++PL+D +++
Sbjct:    8 KKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAA 72          
BLAST of DC900468 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.826e-11
Identity = 22/65 (33.85%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   38 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGAGTDPSDANXIHPFDDYNKPLMDFMSS 232
            K HF+LVHG+  GAWCWY+V   +  +G++ + +++  +G  P+  + +  F++Y++PL+D +++
Sbjct:    8 KKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAA 72          
The following BLAST results are available for this feature:
BLAST of DC900468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PNAE_RAUSE2.985e-1547.30Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
PPD_RAPSA6.651e-1545.07Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH5.630e-1446.48Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
HNL_MANES1.387e-1240.85Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
HNL_HEVBR1.387e-1243.66Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
Y1399_ARATH8.989e-1242.86Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PIR7B_ORYSJ5.826e-1133.85Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI5.826e-1133.85Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
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Properties
Property NameValue
Genbank descriptionDC900468 VSS Citrus sinensis cDNA clone VSSM036 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900468 ID=DC900468; Name=DC900468; organism=Citrus sinensis; type=EST; length=261bp
GGCACGAGGAGAAATTAAAAAACCAGCTGAAGTACAGAAGCCACACTTTG
TGCTGGTGCATGGCATAAGTGGAGGAGCATGGTGCTGGTACAAAGTCAGA
TGCCTCATGGAGAATTCAGGCTACAAAGTTTCATGCATCAATCTCAAAGG
TGCTGGAACTGATCCATCCGATGCAAATNCTATTCATCCTTTTGATGATT
ATAACAAACCTCTCATGGACTTCATGTCTTCTTTGACTGATAATTGAAAG
GTGATATGGTT
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