CX043886

Overview
NameCX043886
Unique NameCX043886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10363 contig Csv1_Contig10363:206..1033. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C63_ARATH (Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.788e-54
Identity = 102/148 (68.92%), Postives = 128/148 (86.49%), Query Frame = -3
Query:  383 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAE 826
            ++YRDP+FQ+ GNPIPL+RPAMTAEPSI++RKL+PQDLFLIFASDGLWE L+DE AVEIV K+PR GIA+RLVRAAL+EAA+KRE+ Y +IKK+ +GIRRHFHDDI+VIV+YLD ++  SSNS+      G  +AP DI+SL++DEAE
Sbjct:  226 EYYRDPIFQRHGNPIPLRRPAMTAEPSIIVRKLKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRTGIARRLVRAALEEAAKKREMRYGDIKKIAKGIRRHFHDDISVIVVYLDQNKTSSSNSKLVKQ--GGITAPPDIYSLHSDEAE 371          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C78_ORYSJ (Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.155e-50
Identity = 101/158 (63.92%), Postives = 123/158 (77.85%), Query Frame = -3
Query:  353 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQHMLHPL 826
            +F RDP+F+Q+   IPLKRP MTAEPSI   +LR QDLFLIFASDGLWEQLTD+AAV+IV KNPRAGIAKRLVRAAL EAARKRE+ Y +IK ++RG RR+FHDDITV+V+YLDHH+ G   +    N+   T+APVDIFS +++E +       HPL
Sbjct:  230 EFARDPIFRQYVCSIPLKRPVMTAEPSIKEHQLRQQDLFLIFASDGLWEQLTDKAAVDIVFKNPRAGIAKRLVRAALTEAARKREMRYTDIKHIERGSRRNFHDDITVVVVYLDHHKHGVRPNLGNRNSFRFTNAPVDIFSGSSEEVDH------HPL 381          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.551e-49
Identity = 91/152 (59.87%), Postives = 125/152 (82.24%), Query Frame = -3
Query:  371 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQ 826
            ++  DPVF+  G PIPLKRPA++AEPSI +RKL+P DLFLIFASDGLWE L+D+AAV+IV KNPR GIA RLV+AAL+EA RKREV ++++K +++G+RRHFHDDI+VIV+YLD H +G  ++R   ++  CT+APVDI+S N+ ++ + +Q
Sbjct:  223 EYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANRLVKAALKEATRKREVSFRDLKTIEKGVRRHFHDDISVIVVYLDRH-RGRRHTRVVDSSSNCTNAPVDIYSSNSGQSVETLQ 373          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.551e-49
Identity = 91/152 (59.87%), Postives = 125/152 (82.24%), Query Frame = -3
Query:  371 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQ 826
            ++  DPVF+  G PIPLKRPA++AEPSI +RKL+P DLFLIFASDGLWE L+D+AAV+IV KNPR GIA RLV+AAL+EA RKREV ++++K +++G+RRHFHDDI+VIV+YLD H +G  ++R   ++  CT+APVDI+S N+ ++ + +Q
Sbjct:  223 EYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANRLVKAALKEATRKREVSFRDLKTIEKGVRRHFHDDISVIVVYLDRH-RGRRHTRVVDSSSNCTNAPVDIYSSNSGQSVETLQ 373          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C29_ORYSJ (Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.159e-38
Identity = 82/151 (54.30%), Postives = 107/151 (70.86%), Query Frame = -3
Query:  362 DPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGSSNSRSKHNAIGCTSAPVDIFSLNADEAEDDVQHML 814
            +P+ QQ   P PL+RP M+A P+I  RKLRP D F+IFASDGLWEQLTDEAAV IV  +PR G+A RLVRAA  EAARK++V Y+ I+ +++G RRHFHDDITV+V++LD           + + I  T  PVD+FSL+ D+ ED  + +L
Sbjct:  245 NPMLQQTICPFPLRRPVMSAVPTIKTRKLRPGDQFVIFASDGLWEQLTDEAAVAIVAGSPRRGVAMRLVRAAQLEAARKKDVKYERIRTIEKGQRRHFHDDITVVVLFLDK----CRGKAGRGDEIDGTDGPVDVFSLSPDDREDPTRPVL 391          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C43_ORYSJ (Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584366 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 6.502e-35
Identity = 71/115 (61.74%), Postives = 90/115 (78.26%), Query Frame = -3
Query:  482 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDH 826
            +F  DP   +F    PL+RP +T+EPSI  R L  QD F IFASDGLWE LT++ AVEIV  NPR GIA+RLV+AAL+EAARKRE+ Y +IKKL++G+RR FHDDITV+V+++DH
Sbjct:  240 EFALDPSMTRFHLSEPLRRPVLTSEPSIYTRVLHSQDSFFIFASDGLWEHLTNQQAVEIVHNNPREGIARRLVKAALKEAARKREMKYNDIKKLEKGVRRFFHDDITVVVVFIDH 354          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C25_ORYSJ (Probable protein phosphatase 2C 25 OS=Oryza sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.491e-35
Identity = 71/115 (61.74%), Postives = 91/115 (79.13%), Query Frame = -3
Query:  482 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDH 826
            +F  DP   +F    PL+RP +TAEPSI  R L  QD F+IFASDGLWE LT++ AV+IV KNPRAGIAKRLV  AL+EAARKRE+ + ++KK+++G+RR FHDDITV+V+Y+DH
Sbjct:  239 EFALDPSITRFRLSEPLRRPVLTAEPSICTRVLSLQDQFVIFASDGLWEHLTNQQAVDIVYKNPRAGIAKRLVNTALKEAARKREMRFVDLKKVEKGVRRFFHDDITVVVVYIDH 353          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C42_ARATH (Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.109e-34
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = -3
Query:  458 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHH--QKGSSNS 826
            +F ++P+ Q+F    P+KRP M+A P+IL   L P D FLIFASDGLWE LT+E AVEIV  +PRAG AKRL++AAL EAARKRE+ Y +++K+ + +RRHFHDDITVIV++L+H    +G  NS
Sbjct:  246 EFNKEPISQKFRIAEPMKRPLMSATPTILSHPLHPNDSFLIFASDGLWEHLTNEKAVEIVHNHPRAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVVFLNHDLISRGHINS 370          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.227e-34
Identity = 66/114 (57.89%), Postives = 94/114 (82.46%), Query Frame = -3
Query:  485 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLD 826
            +F ++P++ ++    P+KRP ++ EPSI +  L+P D FLIFASDGLWEQL+++ AVEIV  +PR GIA+RLV+AALQEAA+KRE+ Y ++ K++RG+RRHFHDDITV+V++LD
Sbjct:  244 EFNKEPLYTKYRLREPMKRPILSWEPSITVHDLQPDDQFLIFASDGLWEQLSNQEAVEIVQNHPRNGIARRLVKAALQEAAKKREMRYSDLNKIERGVRRHFHDDITVVVLFLD 357          
BLAST of CX043886 vs. ExPASy Swiss-Prot
Match: P2C46_ARATH (Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.214e-34
Identity = 65/120 (54.17%), Postives = 97/120 (80.83%), Query Frame = -3
Query:  467 DFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAVEIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQKGS 826
            +F ++P++ ++    P KRP ++ EP+I   +++PQD FLIFASDGLWEQ++++ AV+IV  +PR GIA+RLV+ ALQEAA+KRE+ Y ++KK++RG+RRHFHDDITV++I+LD +Q  S
Sbjct:  241 EFNKEPLYTKYRIREPFKRPILSGEPTITEHEIQPQDKFLIFASDGLWEQMSNQEAVDIVQNHPRNGIARRLVKMALQEAAKKREMRYSDLKKIERGVRRHFHDDITVVIIFLDTNQVSS 360          
The following BLAST results are available for this feature:
BLAST of CX043886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
P2C63_ARATH4.788e-5468.92Probable protein phosphatase 2C 63 OS=Arabidopsis ... [more]
P2C78_ORYSJ7.155e-5063.92Probable protein phosphatase 2C 78 OS=Oryza sativa... [more]
P2C34_ORYSJ3.551e-4959.87Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C34_ORYSI3.551e-4959.87Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C29_ORYSJ2.159e-3854.30Probable protein phosphatase 2C 29 OS=Oryza sativa... [more]
P2C43_ORYSJ6.502e-3561.74Probable protein phosphatase 2C 43 OS=Oryza sativa... [more]
P2C25_ORYSJ8.491e-3561.74Probable protein phosphatase 2C 25 OS=Oryza sativa... [more]
P2C42_ARATH1.109e-3457.60Probable protein phosphatase 2C 42 OS=Arabidopsis ... [more]
P2C79_ARATH3.227e-3457.89Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]
P2C46_ARATH4.214e-3454.17Probable protein phosphatase 2C 46 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14A10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14A10-B20-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043886 ID=CX043886; Name=CX043886; organism=Citrus sinensis; type=EST; length=828bp
TTTTTTTTTTTTTAATCCAGTTTCAATTTTCAATTCATCATATATCTTTG
TAGAGATATCAAAACTCTGTTATCTTCTAGACTATGCAAAACAAAATGGT
TACAAAACTTGTGCTTGAAATTTCTGGGATTCACTATATCAATTTTGAAC
AAAGACAAGATCAATAACATAACCAACAAAACAAAAGAACAATGGTGTTG
GATCTTCACTTGGAAAAATCTACTGCAGCTTGTTTCCAACAGCAACCTAT
CTACAGAAATTGCCTGCGTATACCTCACCATGTACTCGTAACCTTATTGA
AATTTCTATGCGTCAGTGCCTGACCATTTAGAAAGTGGTTTACTTATGCA
GGAAGCGGGTGAAGCATATGCTGCACATCATCTTCTGCTTCATCTGCATT
TAGGGAGAAGATGTCGACAGGTGCACTTGTGCAGCCAATGGCATTGTGTT
TGGATCTGCTGTTGGAGGAGCCTTTTTGATGATGATCAAGATAAATTACA
ATTACTGTAATATCGTCATGGAAATGTCGCCTTATTCCCCTTTTGAGTTT
CTTTATCTCCTTATATCCCACCTCTCTCTTCCTTGCAGCCTCTTGAAGGG
CAGCTCTCACCAATCTCTTAGCGATTCCAGCTCTTGGGTTCTTACAAACA
ATTTCTACTGCTGCTTCATCAGTTAACTGTTCCCAAAGGCCATCAGATGC
AAAGATCAGGAATAAGTCTTGTGGCCTAAGTTTCCTAATCAAGATTGATG
GTTCAGCTGTCATTGCAGGTCGTTTTAGAGGAATAGGGTTGCCAAATTGC
TGAAAGACTGGGTCTCTATAAAAATCGG
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