DC900401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.575e-78 Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLYVHS RQF+ +C+IAGTVDFIFGNAAAV QNCDIHAR+PN Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL V+GSF TYLGRPWK YSRTV+MQS I+DVI+PAGW+EW G F + Sbjct: 402 TLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFAL 523 HSP 2 Score: 107.457 bits (267), Expect = 1.575e-78 Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 GNFAL+TLFY E+QN GAGA TS RVKW F+VITSA EAQ +T +FIAGS+WLGSTGFPFSLGL Sbjct: 519 GNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 2.054e-78 Identity = 95/122 (77.87%), Postives = 107/122 (87.70%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLYVHS RQF+ +C+IAGTVDFIFGNAAAV QNCDIHAR+PN Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL V+GSF TYLGRPWK YSRTV+MQS I+D+I+PAGW+EW G F + Sbjct: 402 TLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFAL 523 HSP 2 Score: 107.842 bits (268), Expect = 2.054e-78 Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 GNFAL+TLFY E+QN+GAGA TS RVKW F+VITSA EAQ +T +FIAGS+WLGSTGFPFSLGL Sbjct: 519 GNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.243e-77 Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLYVHS RQF+ C++AGTVDFIFGN AAVFQ+CDIHARRP Q+NMVTAQGR DPNQNTGIVIQKCRIGATSDL V+ SF TYLGRPWK YSRTV+MQS I+DVI PAGW+EW+G F + Sbjct: 401 TLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFAL 522 HSP 2 Score: 105.531 bits (262), Expect = 2.243e-77 Identity = 50/66 (75.76%), Postives = 52/66 (78.79%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 GNFALDTLFY EY NTGAGA TS RVKW KVITS+ EAQ YT FIAG +WL STGFPFSLGL Sbjct: 518 GNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 2.239e-74 Identity = 97/122 (79.51%), Postives = 105/122 (86.07%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLYVHS RQF+ C I GTVDFIFGNAAAV Q+CDI+ARRPN Q+NMVTAQGR DPNQNTGIVIQ CRIG TSDLLAVKG+F TYLGRPWK YSRTV+MQSDISDVI P GW+EWSG F + Sbjct: 405 TLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFAL 526 HSP 2 Score: 92.4337 bits (228), Expect = 2.239e-74 Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G+FALDTL Y EY N G GA T+NRVKW +KVITS EAQ +TA FI G WL STGFPFSL L Sbjct: 522 GSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.448e-73 Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 +LYVHS RQF+ +C IAGTVDFIFGNAA V Q+CDIHARRP Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL V+ SF TYLGRPWK YSRTVVMQS I++VINPAGW+ W G F + Sbjct: 137 SLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFAL 258 HSP 2 Score: 99.7525 bits (247), Expect = 5.448e-73 Identity = 47/66 (71.21%), Postives = 53/66 (80.30%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 GNFALDTL+Y EYQNTGAGA TS RV W FKVITS+ EAQ +T +FIAG +WL +T FPFSLGL Sbjct: 254 GNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.279e-59 Identity = 82/122 (67.21%), Postives = 96/122 (78.69%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLY H+LRQFY I GTVDFIFGN+A VFQNCDI AR P Q+NM+TAQGR+D NQNT I IQKC+I A+SDL VKGS +T+LGRPWK YSRTV+MQS I + I+PAGW+ W GEF + Sbjct: 375 TLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFAL 496 HSP 2 Score: 75.485 bits (184), Expect = 1.279e-59 Identity = 35/62 (56.45%), Postives = 39/62 (62.90%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 562 G FAL TL+Y EY NTG GADTS RV W FKVI + EA+ +T A I G WL TG F Sbjct: 492 GEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 8.096e-56 Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TL+ HSLRQFY I GT+DFIFG+AAAVFQNCDI RRP +Q NM+TAQGRDDP+ N+GI IQ RI A + AVKG F++YLGRPWK+YSRTV +++DI ++I+P GW EWSG + + Sbjct: 337 TLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYAL 458 HSP 2 Score: 73.9442 bits (180), Expect = 8.096e-56 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G++AL TL+Y E+ NTGAGA T RV W F V+ EA +T + FI G +W+ TG PFS G+ Sbjct: 454 GSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.752e-55 Identity = 76/122 (62.30%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLY H+ RQFY I GTVDFIFGNAA VFQNC++ R+ Q N +TAQGR DPNQNTG IQ C I A++DL V+ +F++YLGRPWK YSRTVVM+S ISDVI+PAGW EW +F + Sbjct: 361 TLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFAL 482 HSP 2 Score: 75.485 bits (184), Expect = 6.752e-55 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 2 Query: 380 NFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 +FAL TLFY EY+N G G+ TS RVKW + VITS A+ +T A I G +WLGSTG ++ GL Sbjct: 479 DFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.147e-54 Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLY HSLRQFY C + GTVDFIFGNAA V QNC+++ R+P Q N VTAQGR DPNQNTG I C I DL + +TYLGRPWK YSRTVVMQ+ I + P+GW WSG+F + Sbjct: 377 TLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFAL 498 HSP 2 Score: 79.337 bits (194), Expect = 1.147e-54 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G+FAL TL+YAEY NTG G+DT+NRV W + VI +A +A +T NF+ G W+G TG PF GL Sbjct: 494 GDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558
BLAST of DC900401 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5) HSP 1 Score: 162.925 bits (411), Expect = 1.950e-54 Identity = 78/122 (63.93%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 25 TLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGEFCI 390 TLY HS RQFY + GTVDFIFGNAA VFQ C + AR+P Q+NMVTAQGR DPNQ TG IQ C I A+SDL V F TYLGRPWK YSRTVVM+S + +INPAGW EW G+F + Sbjct: 362 TLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFAL 483 HSP 2 Score: 72.0182 bits (175), Expect = 1.950e-54 Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 2 Query: 377 GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 574 G+FAL TL+Y E+ N G GA TS RVKW + VIT A+A +T A I G +WL STG + GL Sbjct: 479 GDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544 The following BLAST results are available for this feature:
BLAST of DC900401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900401 ID=DC900401; Name=DC900401; organism=Citrus sinensis; type=EST; length=576bpback to top |