DC900398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: Y1461_ARATH (Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 7.772e-102 Identity = 177/200 (88.50%), Postives = 189/200 (94.50%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601 KIVALKKVRFDNLEPESVKFMAREIL+LRRLDHPNV+KLEGLVTSRMSCSLYLVF YM+HDLAGL +SP VKF+E +VKC M QL+SGLEHCH+ GVLHRDIKGSNLLIDD GVLKIADFGLA+ FDPNHK PMTSRVVTLWYR PELLLGATDYGVG+DLWSAGCILAELLAG+PIMPGRTEVEQLHKIYKLCGSPSE+ Sbjct: 142 KIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFQYMDHDLAGLASSPVVKFSESEVKCLMRQLISGLEHCHSRGVLHRDIKGSNLLIDDGGVLKIADFGLATIFDPNHKRPMTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSED 341
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 3.410e-65 Identity = 126/214 (58.88%), Postives = 155/214 (72.43%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTS--------------RMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598 +IVALKK+R DN E E A REI IL++L H NVI L+ +VTS + +Y+VF YM+HDL GL P ++FT PQ+KCYM QLL+GL +CH N VLHRDIKGSNLLID++G LK+ADFGLA + +H +T+RV+TLWYRPPELLLGAT YG +D+WS GCI AELL GKPI+PG+TE EQL+KIY+LCGSP E Sbjct: 50 EIVALKKIRMDN-EREGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLNGKPILPGKTENEQLNKIYELCGSPDE 262
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 6.432e-64 Identity = 124/215 (57.67%), Postives = 154/215 (71.63%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTS---------------RMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598 +IVALKK+R DN E E A REI IL++L H NVI+L+ +VTS + S+Y+VF YM+HDL GL P ++FT PQ+KCYM QLL+GL +CH N VLHRDIKGSNLLID++G LK+ADFGLA F +H +T+RV+TLWYRPPELLLG+T YG VD+WS GCI AELL GKPI+PG+ E EQL KI+ +CG+P E Sbjct: 49 EIVALKKIRMDN-EREGFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIHGNKYKGSIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMKQLLTGLHYCHINQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLNGKPILPGKNEPEQLSKIFDVCGTPDE 262
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 6.432e-64 Identity = 123/215 (57.21%), Postives = 155/215 (72.09%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTS--------------RMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601 +IVALKK+R DN E E A REI IL++L H NVI+L+ +VTS + +Y+VF YM+HDL GL P ++FT PQ+KCYM QLL+GL +CH N VLHRDIKGSNLLID++G LK+ADFGLA + +H +T+RV+TLWYRPPELLLGAT YG +D+WS GCI AELL KPI+PG+ E EQL+KI++LCGSP E+ Sbjct: 50 EIVALKKIRMDN-EREGFPITAIREIKILKKLHHENVIQLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLHAKPILPGKNEQEQLNKIFELCGSPDEK 263
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKC2_ORYSJ (Cyclin-dependent kinase C-2 OS=Oryza sativa subsp. japonica GN=CDKC-2 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.097e-63 Identity = 124/215 (57.67%), Postives = 154/215 (71.63%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTS---------------RMSCSLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSE 598 +IVALKK+R DN E E A REI IL++L H NVI+L+ +VTS + S+Y+VF YM+HDL GL P ++FT PQ+KCYM QLL+GL +CH N VLHRDIKGSNLLID++G LK+ADFGLA F +H +T+RV+TLWYRPPELLLG+T YG VD+WS GCI AELL GKPI+ G+ E EQL KI++LCG+P E Sbjct: 49 EIVALKKIRMDN-EREGFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIEGNKYKGSIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGSTRYGPAVDMWSVGCIFAELLNGKPILTGKNEPEQLSKIFELCGTPDE 262
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.286e-50 Identity = 101/206 (49.03%), Postives = 133/206 (64.56%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSC--------SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592 ++VALKKVR DN E E A REI ILR+L H +V+ ++ +VT + + YLVF YM+HDL GL+ S V F+E +K +M QL+ GLE+CH LHRDIK SN+L+++ G +K+ADFGLA ++ P T++V+TLWYRPPELLLG Y +D+WS GCIL EL KPI E+ QL I +LCGSP Sbjct: 751 ELVALKKVRLDN-EKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSP 955
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK12_RAT (Cell division protein kinase 12 OS=Rattus norvegicus GN=Cdk12 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.016e-50 Identity = 100/206 (48.54%), Postives = 133/206 (64.56%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSC--------SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592 ++VALKKVR DN E E A REI ILR+L H +V+ ++ +VT + + YLVF YM+HDL GL+ S V F+E +K +M QL+ GL++CH LHRDIK SN+L+++ G +K+ADFGLA ++ P T++V+TLWYRPPELLLG Y +D+WS GCIL EL KPI E+ QL I +LCGSP Sbjct: 747 ELVALKKVRLDN-EKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSP 951
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK12_MOUSE (Cell division protein kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 9.016e-50 Identity = 100/206 (48.54%), Postives = 133/206 (64.56%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSC--------SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592 ++VALKKVR DN E E A REI ILR+L H +V+ ++ +VT + + YLVF YM+HDL GL+ S V F+E +K +M QL+ GL++CH LHRDIK SN+L+++ G +K+ADFGLA ++ P T++V+TLWYRPPELLLG Y +D+WS GCIL EL KPI E+ QL I +LCGSP Sbjct: 747 ELVALKKVRLDN-EKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSP 951
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDKC3_ORYSJ (Cyclin-dependent kinase C-3 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.538e-49 Identity = 106/211 (50.24%), Postives = 138/211 (65.40%), Query Frame = 2 Query: 11 ALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSC-------------SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDG-VLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPSEE 601 ALKK++ D+ + + + REI +L++LDH N+I+L+ +V S + +Y+VF YM+HDL ++ T QVK YM QLL GL +CH N VLHRDIKG+NLLI G +LK+ADFGLA F + T+ V+TLWYRPPELLLGAT+Y VD+WS GCI AE L KP+ PGRTE EQL KI++LCG P+EE Sbjct: 54 ALKKIKLDDGKEGFPRQILREIKLLKKLDHENIIRLKEIVVSPGTAHGAGGSDDYMYRGDIYMVFEYMDHDLKKVLHHS----TPSQVKYYMEQLLKGLHYCHVNNVLHRDIKGANLLISGGGKLLKLADFGLARPFTRDGS--FTNHVITLWYRPPELLLGATNYAEAVDIWSVGCIFAEFLLRKPLFPGRTEQEQLSKIFELCGFPNEE 258
BLAST of DC900398 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 5.844e-49 Identity = 99/206 (48.06%), Postives = 131/206 (63.59%), Query Frame = 2 Query: 2 KIVALKKVRFDNLEPESVKFMA-REILILRRLDHPNVIKLEGLVTSRMSC--------SLYLVFHYMEHDLAGLVASPEVKFTEPQVKCYMHQLLSGLEHCHNNGVLHRDIKGSNLLIDDDGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSP 592 ++VALKKVR DN E E A REI ILR+L H ++I ++ +VT + + YLVF YM+HDL GL+ S V F E +K +M QL+ GL++CH LHRDIK SN+L+++ G +K+ADFGLA + P T++V+TLWYRPPELLLG Y +D+WS GCIL EL KPI E+ QL I ++CGSP Sbjct: 729 EMVALKKVRLDN-EKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSP 933 The following BLAST results are available for this feature:
BLAST of DC900398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900398 ID=DC900398; Name=DC900398; organism=Citrus sinensis; type=EST; length=602bpback to top |