DC900396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7373_ARATH (UPF0737 protein AFP3 OS=Arabidopsis thaliana GN=AFP3 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.419e-33 Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYPIL 214 EDMP VSTTGDGP+GK+I GFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP P L Sbjct: 161 EDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPSPFL 231
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7372_WHEAT (UPF0737 protein 2 OS=Triticum aestivum GN=AFP-B1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.374e-28 Identity = 55/69 (79.71%), Postives = 64/69 (92.75%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 208 EDMP VS+ DGP+GK+I+GFLY+YRKGEEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 244 EDMPMVSSKVDGPNGKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPAP 312
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7371_WHEAT (UPF0737 protein 1 OS=Triticum aestivum GN=AFP-A1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.374e-28 Identity = 55/69 (79.71%), Postives = 64/69 (92.75%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 208 EDMP VS+ DGP+GK+I+GFLY+YRKGEEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 243 EDMPMVSSKVDGPNGKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPSP 311
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7371_ORYSJ (UPF0737 protein Os03g0214200 OS=Oryza sativa subsp. japonica GN=Os03g0214200 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.998e-28 Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 208 ++MPCV T G P+GKR+EGFLY+YRKGEEVRIVCVCHGSFL+PAEFVKHAGGGDVA+PL+HIVVNP P Sbjct: 330 QEMPCVCTKGL-PNGKRVEGFLYKYRKGEEVRIVCVCHGSFLTPAEFVKHAGGGDVANPLRHIVVNPIP 397
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7373_WHEAT (UPF0737 protein 3 OS=Triticum aestivum GN=AFP-D1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.820e-28 Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 208 EDMP VS+ DGP+ K+I+GFLY+YRKGEEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 238 EDMPIVSSKVDGPNSKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPSP 306
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7376_MAIZE (UPF0737 protein 6 OS=Zea mays PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.591e-27 Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 208 EDMP VS+ +GP+ +RI+GFLYRY+KGE+VRIVCVCHGSFL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 218 EDMPMVSSKVEGPNARRIDGFLYRYKKGEDVRIVCVCHGSFLTPAEFVKHAGGGDVPNPLRHIVVNPAP 286
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7372_ORYSJ (UPF0737 protein Os07g0602900 OS=Oryza sativa subsp. japonica GN=Os07g0602900 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.847e-27 Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 202 EDMP VS+ DGP+G++I+GFLY+YRK EEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP Sbjct: 247 EDMPMVSSRVDGPNGRKIDGFLYKYRKREEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNP 313
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7372_ARATH (UPF0737 protein AFP2 OS=Arabidopsis thaliana GN=AFP2 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.887e-26 Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 2 Query: 5 DMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVN 199 DMPCV T GDGP+G+R++G LY+Y KGEEVRI+C+CHGSFL+PAEFVKH GGGDV PL+HIVVN Sbjct: 278 DMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCICHGSFLTPAEFVKHGGGGDVDRPLRHIVVN 342
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7375_MAIZE (UPF0737 protein 5 OS=Zea mays PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.089e-25 Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 2 Query: 2 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 202 EDMP VS +GP G++ +GFLY+YRKGEEVRIVCVCHGSFL+PAEFV+HAGGG+V +PL+HIVVNP Sbjct: 235 EDMPMVSYKAEGPGGRKTDGFLYKYRKGEEVRIVCVCHGSFLTPAEFVEHAGGGEVPNPLRHIVVNP 301
BLAST of DC900396 vs. ExPASy Swiss-Prot
Match: U7373_ORYSJ (UPF0737 protein Os03g0419100 OS=Oryza sativa subsp. japonica GN=Os03g0419100 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.426e-25 Identity = 49/68 (72.06%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 DMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 208 DMP VS+ +GP+G++I+GFLY+YRKGE+V I+CVCHG F SPAEFVKHAGGGDV++PL+HIVVNP P Sbjct: 236 DMPMVSSKVEGPNGRKIDGFLYKYRKGEDVSIMCVCHGKFHSPAEFVKHAGGGDVSNPLRHIVVNPSP 303 The following BLAST results are available for this feature:
BLAST of DC900396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900396 ID=DC900396; Name=DC900396; organism=Citrus sinensis; type=EST; length=379bpback to top |