CX043821

Overview
NameCX043821
Unique NameCX043821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.000e-86
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  976 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1092          

HSP 2 Score: 152.525 bits (384), Expect = 3.000e-86
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1
Query:    1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR
Sbjct:  847 HCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWR 935          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.914e-86
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091          

HSP 2 Score: 152.14 bits (383), Expect = 3.914e-86
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1
Query:    1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR
Sbjct:  846 HCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWR 934          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.914e-86
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091          

HSP 2 Score: 152.14 bits (383), Expect = 3.914e-86
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1
Query:    1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR
Sbjct:  846 HCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWR 934          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.478e-85
Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A +NG    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNNGPLLEECGLDC 1091          

HSP 2 Score: 148.288 bits (373), Expect = 1.478e-85
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 1
Query:    1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IF TGILE+RWSGV I+D WR
Sbjct:  846 HCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWR 934          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.750e-84
Identity = 90/118 (76.27%), Postives = 103/118 (87.29%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613
            D DF ELY FKWT+LLIPPTTVLI+N+VG+VAG+S AIN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPF    TK     +CGINC
Sbjct:  910 DDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVL-KTKGPDTSKCGINC 1026          

HSP 2 Score: 134.42 bits (337), Expect = 2.750e-84
Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 1
Query:    1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            H P+WYGY G +LK LER AY NT +YP TSIPL+AYC LPA CLLT+KFI+P IS FAS++FI LF+SI  TGILE+RWSGV IE+ WR
Sbjct:  780 HSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWR 869          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.673e-83
Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613
            D +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV++DPF        +N     +C
Sbjct:  872 DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNSCANFDC 989          

HSP 2 Score: 144.821 bits (364), Expect = 6.673e-83
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 1
Query:    1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCP+WYGY G RLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI  T +LE+RWSG+GIED WR
Sbjct:  742 HCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWR 831          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.673e-83
Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613
            D +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV++DPF        +N     +C
Sbjct:  872 DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNSCANFDC 989          

HSP 2 Score: 144.821 bits (364), Expect = 6.673e-83
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 1
Query:    1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCP+WYGY G RLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI  T +LE+RWSG+GIED WR
Sbjct:  742 HCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWR 831          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.966e-81
Identity = 83/118 (70.34%), Postives = 102/118 (86.44%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613
            DG+F+ELY+FKWTSLLIPPTT+LI+N+VG++ GVS AIN+GY SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF S D        CG++C
Sbjct:  971 DGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKDGPVLE--ICGLDC 1086          

HSP 2 Score: 137.502 bits (345), Expect = 7.966e-81
Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 1
Query:    1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCPIWYGY G LK LER +YIN++VYP TS+PL+ YC+LPA CLLT KFI+PEISN+A + F+L+F+SI  TGILE++W  +GI+D WR
Sbjct:  842 HCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWR 930          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.677e-80
Identity = 82/119 (68.91%), Postives = 101/119 (84.87%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTS-DDTKANSNGQCGINC 613
            D +F ELY+ KWT+LLIPPT++LI+NLVG+VAG S A+N GY++WGPLFGK+FFA WVI HLYPFLKGL+GRQNRTPTIVI+WSILLAS+FSL+WVR++PF S  DT + S     I+C
Sbjct:  867 DLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINPFVSKTDTTSLSLNCLLIDC 985          

HSP 2 Score: 143.28 bits (360), Expect = 6.677e-80
Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 1
Query:    1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCP+WYG +G RLKLL+RLAYINTIVYP TS+PL+AYCTLPA CLLT KFIIP +SN ASM F+ LFISI  T +LE+RWSGV IED WR
Sbjct:  737 HCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWR 826          
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.481e-79
Identity = 77/118 (65.25%), Postives = 100/118 (84.75%), Query Frame = 2
Query:  260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613
            DG F+ELY+FKWT+LLIPPTT+LI+N++G++ GVS AI++GY SWGPLFG+LFFA+WVI HLYPFLKG+LG+Q++ PTI++VWSILLASI +LLWVRV+PF +          CG+NC
Sbjct:  967 DGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAKGGPVLE--ICGLNC 1082          

HSP 2 Score: 142.124 bits (357), Expect = 1.481e-79
Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 1
Query:    1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267
            HCPIWYGY G LK LER +YIN++VYP TS+PLI YC+LPA CLLT KFI+PEISN+A + F+L+FISI  TGILE++W GVGI+D WR
Sbjct:  838 HCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWR 926          
The following BLAST results are available for this feature:
BLAST of CX043821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CESA3_ORYSJ3.000e-8672.13Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA5_ORYSJ3.914e-8672.13Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI3.914e-8672.13Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA6_ORYSJ1.478e-8572.95Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA7_ARATH2.750e-8476.27Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ORYSJ6.673e-8366.95Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI6.673e-8366.95Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA9_ARATH7.966e-8170.34Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA8_ARATH6.677e-8068.91Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA2_ARATH1.481e-7965.25Cellulose synthase A catalytic subunit 2 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13F05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13F05-L9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043821 ID=CX043821; Name=CX043821; organism=Citrus sinensis; type=EST; length=698bp
CATTGCCCTATATGGTATGGCTACAATGGGAGATTGAAGCTTTTGGAGAG
ACTGGCGTACATTAACACTATTGTCTACCCACTGACCTCCATCCCACTAA
TTGCTTACTGCACGCTTCCTGCTTTTTGCCTTCTTACTAATAAATTCATC
ATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTTATTCTACTTTTCAT
TTCCATTTTTGCTACTGGAATACTGGAGATTAGATGGAGTGGGGTTGGTA
TTGAGGACTGATGGAGATTTTGCAGAGCTTTATGTATTCAAATGGACATC
TCTTCTCATCCCTCCAACTACAGTCCTGATTGTGAACTTGGTGGGTATTG
TAGCTGGTGTATCATGGGCCATAAACAGTGGTTACCAATCATGGGGTCCA
CTCTTTGGCAAGCTATTCTTTGCCATATGGGTCATTGCCCATCTGTATCC
TTTCCTGAAGGGTCTGTTGGGTCGTCAAAACCGCACACCAACAATTGTCA
TTGTGTGGTCTATCCTACTTGCTTCCATTTTCTCCTTGCTGTGGGTGCGT
GTTGATCCCTTTACCTCTGATGACACCAAAGCCAATTCAAACGGTCAATG
TGGCATCAATTGCTAGTGCATGTTGGATGATTATTTGTGGCTTCAAATGC
CATTCTTCCTTCAAGCTCTCATCAGTGTATATAAGAAGAAATTATGTC
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