CX043821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.000e-86 Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613 D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF A ++G +CG++C Sbjct: 976 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1092 HSP 2 Score: 152.525 bits (384), Expect = 3.000e-86 Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR Sbjct: 847 HCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWR 935
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.914e-86 Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613 D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF A ++G +CG++C Sbjct: 975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091 HSP 2 Score: 152.14 bits (383), Expect = 3.914e-86 Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR Sbjct: 846 HCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWR 934
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.914e-86 Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613 D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF A ++G +CG++C Sbjct: 975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091 HSP 2 Score: 152.14 bits (383), Expect = 3.914e-86 Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR Sbjct: 846 HCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWR 934
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.478e-85 Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 613 D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF A +NG +CG++C Sbjct: 975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNNGPLLEECGLDC 1091 HSP 2 Score: 148.288 bits (373), Expect = 1.478e-85 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 1 Query: 1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCP+WYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IF TGILE+RWSGV I+D WR Sbjct: 846 HCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWR 934
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.750e-84 Identity = 90/118 (76.27%), Postives = 103/118 (87.29%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613 D DF ELY FKWT+LLIPPTTVLI+N+VG+VAG+S AIN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPF TK +CGINC Sbjct: 910 DDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVL-KTKGPDTSKCGINC 1026 HSP 2 Score: 134.42 bits (337), Expect = 2.750e-84 Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 H P+WYGY G +LK LER AY NT +YP TSIPL+AYC LPA CLLT+KFI+P IS FAS++FI LF+SI TGILE+RWSGV IE+ WR Sbjct: 780 HSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWR 869
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.673e-83 Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613 D +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV++DPF +N +C Sbjct: 872 DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNSCANFDC 989 HSP 2 Score: 144.821 bits (364), Expect = 6.673e-83 Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCP+WYGY G RLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI T +LE+RWSG+GIED WR Sbjct: 742 HCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWR 831
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.673e-83 Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613 D +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV++DPF +N +C Sbjct: 872 DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNSCANFDC 989 HSP 2 Score: 144.821 bits (364), Expect = 6.673e-83 Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCP+WYGY G RLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI T +LE+RWSG+GIED WR Sbjct: 742 HCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWR 831
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.966e-81 Identity = 83/118 (70.34%), Postives = 102/118 (86.44%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613 DG+F+ELY+FKWTSLLIPPTT+LI+N+VG++ GVS AIN+GY SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF S D CG++C Sbjct: 971 DGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKDGPVLE--ICGLDC 1086 HSP 2 Score: 137.502 bits (345), Expect = 7.966e-81 Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCPIWYGY G LK LER +YIN++VYP TS+PL+ YC+LPA CLLT KFI+PEISN+A + F+L+F+SI TGILE++W +GI+D WR Sbjct: 842 HCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWR 930
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.677e-80 Identity = 82/119 (68.91%), Postives = 101/119 (84.87%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTS-DDTKANSNGQCGINC 613 D +F ELY+ KWT+LLIPPT++LI+NLVG+VAG S A+N GY++WGPLFGK+FFA WVI HLYPFLKGL+GRQNRTPTIVI+WSILLAS+FSL+WVR++PF S DT + S I+C Sbjct: 867 DLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINPFVSKTDTTSLSLNCLLIDC 985 HSP 2 Score: 143.28 bits (360), Expect = 6.677e-80 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 1 HCPIWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCP+WYG +G RLKLL+RLAYINTIVYP TS+PL+AYCTLPA CLLT KFIIP +SN ASM F+ LFISI T +LE+RWSGV IED WR Sbjct: 737 HCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWR 826
BLAST of CX043821 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.481e-79 Identity = 77/118 (65.25%), Postives = 100/118 (84.75%), Query Frame = 2 Query: 260 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 613 DG F+ELY+FKWT+LLIPPTT+LI+N++G++ GVS AI++GY SWGPLFG+LFFA+WVI HLYPFLKG+LG+Q++ PTI++VWSILLASI +LLWVRV+PF + CG+NC Sbjct: 967 DGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAKGGPVLE--ICGLNC 1082 HSP 2 Score: 142.124 bits (357), Expect = 1.481e-79 Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 1 Query: 1 HCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 267 HCPIWYGY G LK LER +YIN++VYP TS+PLI YC+LPA CLLT KFI+PEISN+A + F+L+FISI TGILE++W GVGI+D WR Sbjct: 838 HCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWR 926 The following BLAST results are available for this feature:
BLAST of CX043821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043821 ID=CX043821; Name=CX043821; organism=Citrus sinensis; type=EST; length=698bpback to top |