DC900359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900359 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.041e-26 Identity = 89/280 (31.79%), Postives = 131/280 (46.79%), Query Frame = 3 Query: 36 DGTMTRNHSLYPNTAATPDPNDDTIALSKDVPVNQSNNTWVRIFLPRQALDSSTDTKF---------PLVVYTHGGGLLLLSAATKIYHDLCSEIVARVPAIIVSVDYRLAPEHRLPAAYDDAVEVLQWVKTTQEHWLRQYADFS-SCFIMGDSGGGNIAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPPQTDFTWQLALPIGADRDHEYSNPIVGGGSKFLDQFRLLGWKVMVTGGSEDTLFDRQVELAKLMEQKGVNV 845 DGT R+ + + + + N S DV +++ N R++ P A S + T P++V+ HGG SA + IY LC +V A++VSV+YR APE+R P AYDD VL+WV ++ WLR D F+ GDS GGNI ++ FGG +RTESE RL + + D+ W+ LP G DR+H +P G SK L+ V+V G D + D Q++ A+ +++ G V Sbjct: 38 DGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS--WLRSKKDSKVRIFLAGDSSGGNIVHN-----VAVRAVESRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPF-GPRSKSLEGLSFPKSLVVVAG--LDLIQDWQLKYAEGLKKAGQEV 307
BLAST of DC900359 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.564e-25 Identity = 90/290 (31.03%), Postives = 130/290 (44.83%), Query Frame = 3 Query: 33 SDGTMTRNHSLYPNTAATPDPNDDTIALSKDVPVNQSNNTWVRIF--------------LPRQALDSSTDTK----FPLVVYTHGGGLLLLSAATKIYHDLCSEIVARVPAIIVSVDYRLAPEHRLPAAYDDAVEVLQWVKTTQEHWLRQYADFSS-CFIMGDSGGGNIAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPPQTDFTWQLALPIGADRDHEYSNPIVGGGSKFLDQFRLLGWKVMVTGGSEDTLFDRQVELAKLMEQKGVNV 845 +DGT R+ Y + + S D ++QS VRI+ + R L+ TD FP++++ HGG + SA++ IY LC V ++VSV+YR APEHR P AYDD L+WV + + ++R D + F+ GDS GGNIA+H FGG +RTESE RL + + D+ W+ LP ADRDH NP G + L ++V+G D DRQ+ A + + G +V Sbjct: 37 ADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS--QPFMRSGGDAQARVFLSGDSSGGNIAHH-----VAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPF-GPNGRRLGGLPFAKSLIIVSG--LDLTCDRQLAYADALREDGHHV 316
BLAST of DC900359 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.191e-22 Identity = 86/282 (30.50%), Postives = 125/282 (44.33%), Query Frame = 3 Query: 36 DGTMTRNHSLYPNTAATPDPNDDTIALSKDVPVNQSNNTWVRIFLPRQA----------LDSSTDTKF-PLVVYTHGGGLLLLSAATKIYHDLCSEIVARVPAIIVSVDYRLAPEHRLPAAYDDAVEVLQWVKTTQEHWLRQYADFS-SCFIMGDSGGGNIAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPPQTDFTWQLALPIGADRDHEYSNPIVGGGSKFLDQFRLLGWKVMVTGGSEDTLFDRQVELAKLMEQKGVNV 845 DGT R+ + Y + T + N S DV +++ N R++ P A L+ D P++++ HGG SA + IY LC +V ++VSV+YR APE+ P AYDD L WV + WL+ D F+ GDS GGNIA++ FGG +RTESE L + + D+ W+ LP G DR+H NP G K L+ V+V G D + D Q+ A+ +++ G V Sbjct: 38 DGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS--RSWLKSKKDSKVHIFLAGDSSGGNIAHN-----VALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRG-KSLEGVSFPKSLVVVAG--LDLIRDWQLAYAEGLKKAGQEV 309
BLAST of DC900359 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.720e-21 Identity = 67/204 (32.84%), Postives = 92/204 (45.10%), Query Frame = 3 Query: 132 VNQSNNTWVRIFLPRQALDS------------STDTKFPLVVYTHGGGLLLLSAATKIYHDLCSEIVARVPAIIVSVDYRLAPEHRLPAAYDDAVEVLQWVKTTQEHWLRQYADFS-SCFIMGDSGGGNIAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPPQTDFTWQLALPIGADRDHEYSNP 704 V+ + N RI+ P L ST P++++ HGG SA + IY C +V ++VSVDYR +PEHR P AYDD L WVK+ WL+ D + ++ GDS GGNIA++ FGG +RT+SE L + + D+ W+ LP G DRDH NP Sbjct: 69 VDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS--RVWLQSGKDSNVYVYLAGDSSGGNIAHN-----VAVRATNEGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNP 265 The following BLAST results are available for this feature:
BLAST of DC900359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900359 ID=DC900359; Name=DC900359; organism=Citrus sinensis; type=EST; length=1140bpback to top |