DC900343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900343 vs. ExPASy Swiss-Prot
Match: C3H6_ARATH (Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana GN=At1g19860 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.306e-26 Identity = 73/154 (47.40%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 93 TSNGGFYAQANGVGVGHHPNSWIKXXXXXXXXXXXXFGPSQPRDLNYYKNLIQQHGGDRQET--LQQFGNRLSHQQPG-TSQEFVN----NPKSRDSKPKIMKPCIYFNSSRGCRHGSKCAYQHDTSSQQRSN------NMPEGQNAKRMKLDR 515 +SNG FYAQ + H P +G RD +YYKNLIQQHGGDRQET +Q G R + Q G + E VN N + RDSKPKIMK C+YFNS+RGCRHG+ C YQHD + Q N N + QNAKRM+ DR Sbjct: 265 SSNGQFYAQPP---ITHIPPM---AYTPHAPQDQPNYGAPPARDASYYKNLIQQHGGDRQETPPVQHLGYRYNLQPGGGPNPEMVNSSNNNQRPRDSKPKIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNINTSDMQNAKRMRFDR 412
BLAST of DC900343 vs. ExPASy Swiss-Prot
Match: C3H30_ORYSJ (Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN=Os04g0663200 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.402e-15 Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 3 Query: 201 FGPSQPRDLNYYKNLIQQHGGDR-QETLQQFGNRLS-HQQPGTSQ----EFVNNPK---SRDSKPKIMKPCIYFNSSRGCRHGSKCAYQHDTSSQQRSNNMPEGQNAKRMKLD 512 FG R + YYK LI QHGG+R ++ +Q G + ++QPG Q + +N SRD K + MKPC YFNS +GCR+G+ C + HD S+ R ++ + + +KR+KLD Sbjct: 351 FGSVPGRGVGYYKTLIHQHGGERLEQPFEQHGMQFGMYRQPGPPQNGGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDHQKQ-KGSKRIKLD 462 The following BLAST results are available for this feature:
BLAST of DC900343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900343 ID=DC900343; Name=DC900343; organism=Citrus sinensis; type=EST; length=796bpback to top |