DC900342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 3.454e-108 Identity = 193/274 (70.44%), Postives = 234/274 (85.40%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQD AV +VAEAIQRSRAGL+DP+RPIASF+F+GPTGVGKTELAKALA++MF+TEEALVRIDMSEYMEKHAVSRLIGAPPGYVGY+EGGQLTE +RRRPYAV+LFDEIEKAH DVFNVFLQILDDGRVTDSQGRTV F NT+IIMTSN+GSQYIL++ + ++ Y + RVM+A R FRPEF+NRVDE+I+F L +DQ+ IV+LQ+ R+Q+R++DR + + +T+ AI L +GYDP YGARP+KR IQ+ +E +AK ILRG+F Sbjct: 575 VVGQDEAVSAVAEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYILDVAGD----DSRYSEMYNRVMEAMRAHFRPEFLNRVDEFIIFHSLRKDQLRQIVQLQVQRLQQRLSDRHITLSLTEKAIDFLAEVGYDPVYGARPLKRAIQKQLETPIAKAILRGDF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2) HSP 1 Score: 386.726 bits (992), Expect = 1.451e-106 Identity = 187/274 (68.25%), Postives = 234/274 (85.40%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQD AV +VA+AIQRSRAGL+DP+RP ASF+F+GPTGVGKTELAKALASYMF+TE+ALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTE +RRRPYAVILFDEIEKAH DVFN+FLQILDDGRVTD+QG TV F NT+IIMTSN+GSQYIL++ + + Y+ ++ RVM+A R FRPEF+NR+DE I+F LD+ ++ IV+LQ++R++ R+ DRK+ ++++D A+ L +GYDP +GARP+KR IQ+ +E ++AK ILRGEF Sbjct: 576 VIGQDEAVTAVADAIQRSRAGLADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQYILDIAGD----NSRYDEMRHRVMEAMRNSFRPEFLNRIDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEF 845
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 380.563 bits (976), Expect = 1.040e-104 Identity = 185/274 (67.52%), Postives = 233/274 (85.04%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQ+ AV +VA+AIQRSRAGLSDP RPIASF+F+GPTGVGKTELAKALA+Y+F+TE+A++RIDMSEYMEKHAVSRLIGAPPGYVGY+EGGQLTE VRRRPY+VILFDEIEKAH DVFNV LQILDDGRVTDS+GRTV F NT++I+TSN+GSQYIL++ + ++ YE ++ RV +A R FRPEF+NRVDE I+F L +DQ+ IVR+QL R+++R++DRK+ + ++ AI L +G+DP YGARP+KRVIQ+ +E +AK ILRG+F Sbjct: 576 VIGQEEAVSAVADAIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSNIGSQYILDVAGD----DSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIAKAILRGQF 845
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 1.150e-103 Identity = 183/275 (66.55%), Postives = 230/275 (83.64%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFK 885 V+GQD AV +VAEAIQRSRAGLSDP+RP ASF+F+GPTGVGKTELAKALA +F+TEEALVRIDMSEYMEKHAVSRL+GAPPGYVGYEEGGQLTE +RRRPY+VILFDEIEKAH DVFNV LQILDDGR+TD+QG V F NT+IIMTSN+GSQYIL++ + ++ YE ++ RVMD R FRPEF+NRVDE I+F L + ++ SIV++Q+ + R+ ++K+ +++TD A+ L ++GYDP YGARP+KR +Q+Y+E +AKGILRG++K Sbjct: 576 VIGQDEAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTIIIMTSNLGSQYILDVAGD----DSRYEEMRSRVMDVMRENFRPEFLNRVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGARPLKRAVQKYLETAIAKGILRGDYK 846
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 2.832e-102 Identity = 181/274 (66.06%), Postives = 232/274 (84.67%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 VVGQ+ AV+ V+EAIQRSRAGL+DP+RPIASF+F+GPTGVGKTELAKALAS++F+ E A+VRIDMSEYMEKH+VSRLIGAPPGYVGY+EGGQLTE VRRRPYAV+LFDEIEKAH+DVFNV LQ+LDDGR+TDSQGRT+ F N VIIMTSN+GS IL + + YE +++ VM A ++ FRPEF+NRVD+ I+F+ L RDQ+++IV+LQ+ R++KR+ADRK+ +++++AAI + GYDP YGARP+KR IQ + N LA+G+L+G+F Sbjct: 577 VVGQEEAVRIVSEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALASFLFDDENAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFKNAVIIMTSNIGSDAILRLGG----NDAYYEQMREEVMRAMQVHFRPEFLNRVDDIIIFRNLRRDQLAAIVKLQIARLEKRLADRKITLKLSEAAIDYIVEAGYDPVYGARPLKRAIQNELVNPLARGLLKGDF 846
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 7.713e-100 Identity = 183/292 (62.67%), Postives = 230/292 (78.77%), Query Frame = 1 Query: 1 KLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRG 876 KL QS V+GQ+ AV++VA+AIQRSRAGLSDP+RPIASF+F+GPTGVGKTEL+KALAS +F++E ALVRIDMSEYMEKH+VSRLIGAPPGYVGYE GGQLTE VRRRPYAVILFDE+EKAH DVFNV LQILDDGRVTD QGRTV FTNTV+I+TSN+GSQ IL++ + ++ Y +++RV DA FRPEF+NR+DE I+F L R+++ IV LQ++R+++R+ DRK+ ++++D A L + GYDP YGARP+KR IQ+ +E +AK IL G Sbjct: 556 KLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILDLGGD----DSQYREMERRVHDALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLCDRKLGLEISDTAADWLANAGYDPVYGARPLKRAIQRELETPIAKSILAG 843
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 362.459 bits (929), Expect = 2.931e-99 Identity = 184/274 (67.15%), Postives = 223/274 (81.39%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQD AV +V++AIQRSRAGLSDP+RP ASF+F+GPTGVGKTELAKALA+++F+TEEA+VRIDMSEYMEKH+VSRLIGAPPGYVGYEEGGQLTE VRRRPY+VILFDEIEKAH DVFNV LQILDDGRVTDSQGRTV F NT+IIMTSN+GSQYI + + YE I RVM+A FRPEF+NR+DE I+F L + Q+ IV++Q R++ R+A RKM ++++DAA+ L G+DP YGARP+KR IQ+ +E +AK ILR F Sbjct: 577 VIGQDEAVTAVSDAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYIFEYGGD----DDRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQKAQLREIVKIQTHRLESRLA-RKMSLKLSDAALDFLAE-GFDPVYGARPLKRAIQRELETTIAKEILRSNF 844
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 4.679e-97 Identity = 169/274 (61.68%), Postives = 221/274 (80.66%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEF 882 V+GQ AV++V+ AI+R+RAG+ DP+RPI SF+FMGPTGVGKTELA+ALA ++F+ ++ALVR+DMSEYMEKH+VSRL+GAPPGYVGYEEGGQL+E VRR PY+V+L DE+EKAH DVFN+ LQ+LDDGR+TDSQGRTV F NTVI+MTSN+GS++IL++ + +T YET++ RVMDA R FRPEF+NRVD+ I+F L R ++S I+R+QL RV+ + D+K+ +++ AA L GYDP YGARP+KR IQ+ +EN LA IL F Sbjct: 579 VIGQQEAVEAVSAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNTVIVMTSNIGSEHILDVSGD----DTQYETMRNRVMDALRSHFRPEFLNRVDDTILFHALSRSEMSHIIRIQLKRVESLLRDQKISFEISPAACDFLVEKGYDPVYGARPLKRAIQREIENPLATKILENTF 848
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 7.981e-97 Identity = 174/273 (63.74%), Postives = 222/273 (81.32%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 VVGQD A+ +VA+AI+R+RAGL DP+RPI SF+F+GPTGVGKTELAK LA+ +F+TEE +VRIDMSEY EKH V+RLIGAPPGYVGYEEGGQLTE VRRRPY+VILFDEIEKAH DVFNV LQ+LDDGR+TD QGRTV F NTVII+TSN+GS I E +YETI++RV + FRPEF+NR+DE +VF+PL R+QI++IV++QL+ V+KR+A+R++ ++++ A+ L GYDP +GARP+KRVIQ+ +E L++ IL GE Sbjct: 560 VVGQDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIILTSNIGSPLIF----EGIQSGQSYETIRERVFGVLQQHFRPEFLNRLDEIVVFRPLAREQIAAIVQIQLEAVRKRLAERRITLELSQEALDFLAQRGYDPVFGARPLKRVIQRELETPLSRKILAGE 828
BLAST of DC900342 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2) HSP 1 Score: 354.369 bits (908), Expect = 7.981e-97 Identity = 173/273 (63.37%), Postives = 228/273 (83.52%), Query Frame = 1 Query: 61 VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMDDETFPKETAYETIKQRVMDAARLIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGE 879 V+GQ+ AV +VA+AIQRSRAGLSDP+RPIASF+F+GPTGVGKTEL+KALA+ +F++++A+VRIDMSEYMEKH VSRLIGAPPGYVGYE GGQLTE VRRRPYAVILFDE+EKAH DVFNV LQILDDGRVTD QGRTV FTNTV+I+TSN+GSQ IL + + P++ + ++QRV +A + FRPEF+NR+D+ I+F+ L+++++ IV LQ++R++ R+ RK+ +Q++D A L ++G+DP YGARP+KR IQ+ +E +AK IL G+ Sbjct: 575 VIGQNQAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILELAGD--PEQ--HTAMEQRVNEALKAKFRPEFLNRLDDQIIFRSLEKEELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETPIAKAILAGQ 843 The following BLAST results are available for this feature:
BLAST of DC900342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900342 ID=DC900342; Name=DC900342; organism=Citrus sinensis; type=EST; length=1211bpback to top |