CX043719

Overview
NameCX043719
Unique NameCX043719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043719_ssr337 microsatellite CX043719_ssr337:337..348. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13574 contig Csv1_Contig13574:602..1414. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.932e-50
Identity = 91/152 (59.87%), Postives = 109/152 (71.71%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G TL  I SKYP IKGINFDLPHVI+ +P YPGV HVGGDMF SVP GDAI +KWI HDWSD HCLK LKNCH+++PE GKVI+ E +LPE P++   ++     DV+++   PGGKERT+ EF  LA  AGF G   VC  +N W+ME  K
Sbjct:  212 GATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.634e-49
Identity = 90/152 (59.21%), Postives = 108/152 (71.05%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G TL  I SKYP IKGINFDLPHVI+ +P YPGV+HVGGDMF SVP GDAI +KWI HDWSDEHC+K LKNC+ ++P+ GKVI+ E VLPE P+ G  +K     DV+++   PGGKERT+ EF  LA  AGF      C  +N W+ME  K
Sbjct:  210 GATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.707e-48
Identity = 88/152 (57.89%), Postives = 108/152 (71.05%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G TL  I SKYP IKGINFDLPHV++ +P YPGV+HVGGDMF SVP GDAI +KWI HDWSD HC+K LK C++++PE GKVI+ E VLPE P+ G  +K     DV+++   PGGKERT+ EF  LA  +GF     VC  +N W+ME  K
Sbjct:  210 GATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 3.803e-48
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G T+  I SKYP IKGINFDL HVI+ +P YPGV+HVG DMF SVP  DAI +KWI HDWSDEHCLK LKNC++++P  GKV+V E +LPE P+    +K     D++++   PGGKERT+ EF  LA  AGF+G R  C  +  WVMEF+K
Sbjct:  208 GATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.967e-48
Identity = 86/153 (56.21%), Postives = 113/153 (73.86%), Query Frame = -3
Query:  353 LGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 811
            +G TLK I SKYP++KGINFDLPHVI+ +P +PG++HVGGDMF SVP GDAI +KWI HDWSDEHC+K LKNC++S+PE GKVI+ E +LPE P++   +K     D +++   PGGKERT+ EF  LA  +GF GI+ VC    + ++E  K
Sbjct:  209 IGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.473e-48
Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G TL  I SKYP I+ INFDLPHVI+ +PEYPG++HVGGDMF SVP GDAI +KWI HDWSDEHCLKLLKNC+ ++P  GKVI+ E +LPE+P++   +K     DV+ +   PGGKERT+ EF  LA  AGF G +  C   N +++EF K
Sbjct:  188 GATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.473e-48
Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G TL  I SKYP I+ INFDLPHVI+ +PEYPG++HVGGDMF SVP GDAI +KWI HDWSDEHCLKLLKNC+ ++P  GKVI+ E +LPE+P++   +K     DV+ +   PGGKERT+ EF  LA  AGF G +  C   N +++EF K
Sbjct:  188 GATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.473e-48
Identity = 86/152 (56.58%), Postives = 109/152 (71.71%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G T+  I SKYP IKGINFDLPHVI+ +P YPGV+ VGGDMF SVP  DAI +KWI HDWSD+HC+KLLKNC++++P  GKVI+VE +LPE P+    +K     D++++   PGGKERT+ +F  LA    FS  R VC  ++ WVMEF K
Sbjct:  208 GATVNMIVSKYPSIKGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.107e-47
Identity = 88/152 (57.89%), Postives = 109/152 (71.71%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G  +  I SKYP IKGINFDLPHVI+ +P+YPGV+HVGGDMF SVP GDAI +KWI HDWSDEHCLK LKNC+ ++P+ GKVI+ E +LP  P+    +K     DV+++   PGGKERT+ EF  LA  +GF GIR  C   N +V+EF K
Sbjct:  212 GAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CX043719 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.107e-47
Identity = 88/152 (57.89%), Postives = 108/152 (71.05%), Query Frame = -3
Query:  353 GNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 808
            G  L  I SKYP IKGINFDLPHVI+ +P+YPGV+HVGGDMF SVP GDAI +KWI HDWSDEHCLK LKNC+ ++P+ GKVI+ E +LP  P++   +K     DV+++   PGGKERT+ EF  LA  AGF G    C   N +V+EF K
Sbjct:  212 GAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
The following BLAST results are available for this feature:
BLAST of CX043719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
COMT1_CATRO6.932e-5059.87Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_OCIBA2.634e-4959.21Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT2_OCIBA1.707e-4857.89Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CAPAN3.803e-4857.24Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
OMT1_ARATH4.967e-4856.21Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
OMT2_CHRAE8.473e-4857.89Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE8.473e-4857.89Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_CAPCH8.473e-4856.58Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_ROSCH1.107e-4757.89Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_PRUDU1.107e-4757.89Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13A06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13A06-B11-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043719 ID=CX043719; Name=CX043719; organism=Citrus sinensis; type=EST; length=813bp
TTTTTTTTTTTTTTTTTGATAAAAAAATGAATGGAAAACTTTATTGATTC
AAAGAGAAAATTTGTTAGCTGGATTCTTATTTGCAAGTCTTACTAATGAA
TTGAGAGAACATTGATAATTATAGCTGTGTGTGGAAACATCTACTGCAAC
AAACTCGTGTGCACATTTCCAGCTAACTATAACAACTTGATTCAACTCTT
AAGTCTGGAGGGAAATATCAACTTGGCTGCTGATTCATTATTATACTGAA
AACCCCAACTGACTTCAACTGCTGACTCAGCATTTATTCTTAACAGAAAG
ATAATCATAAAAGGTTGCTTCAGAATTCATGGGCGGGCACGCACGCACGC
TACTTGTAGAACTCCATAACCCATAAATTGTGAAAAAAGCATACAAATCT
GATGCCACTGAATCCAGCTTCAGTAGCCAATGTCGTGAATTCATGCTTTG
TTCGCTCCTTTCCTCCCGGATATTGAGTCATCACCAGCACATCAGCTAGG
GAATTTATTTTTGAATGAGTGCCATTCTCAGGCAGTTCTGGAAGTACTGA
CTCCACAACAATTACCTTCCCTCCTTCGGGGATACTTTTGTGGCAATTCT
TCAATAACTTCAAGCAATGTTCATCGCTCCAATCGTGCAGTATCCACTTG
ATCAAGATGGCGTCGCCATTTGGAACACTTTGAAACATGTCACCCCCTAC
ATGCTTAACACCAGGATACTCAGGGGAATGCTGTATAACGTGAGGCAAGT
CGAAATTGATGCCCTTAATGTGGGGATACTTGGAAGTAATTGCTTTAAGG
GTATTGCCAAGGG
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