DC900336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 1.297e-101 Identity = 181/195 (92.82%), Postives = 189/195 (96.92%), Query Frame = -1 Query: 3 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSALQ 587 YDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKKVPDKLLDQT V+HLFPITKYLGLLATG TADAR+LV QARNEAAE+RFK+GYEMPVDVLS+WIADKSQVYTQHAYMRPLGVVAM+LGIDEEKGPQL+KCDPAGHFFGHKATSAG KEQEAINFLEKKMKNDPAFSYEETVQTA+SALQ Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQ 203
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 357.451 bits (916), Expect = 6.663e-98 Identity = 173/195 (88.72%), Postives = 186/195 (95.38%), Query Frame = -1 Query: 3 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSALQ 587 Y+RHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDS+CVVT KKVPDKLLD T VTHLFPITKYLGLLATG TADAR+LV QARNEAAE+RF +GYEMPVDVL++WIADKSQVYTQHAYMRPLGVVAMVLGID+E GPQLYKCDPAGH+FGHKATSAGLK+QEAINFLEKKMKNDP+F+YEETVQTA+SALQ Sbjct: 9 YNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQ 203
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 4.319e-97 Identity = 169/195 (86.67%), Postives = 187/195 (95.90%), Query Frame = -1 Query: 3 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSALQ 587 YDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKKVPDKLLDQ+ V+HLFP+TKYLGLLATG TAD+RSLV QARNEAAE+RF++GYEMP D+L++WIADKSQVYTQHAYMRPLGVVAMVLGIDEE+GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +PAF+Y+ETVQTA+SALQ Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQ 203
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 9.621e-97 Identity = 172/195 (88.21%), Postives = 185/195 (94.87%), Query Frame = -1 Query: 3 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSALQ 587 YDRHITIFSPEGRL+QVEYAFKAVK+ +TSIGVRGKDSVCVVTQKKVPDKLLD T VTHLFPITKY+GLLATG TADARSLV+QARNEAAE+RFK+GYEMPVDVL++WIADK+QVYTQHAYMRPLGVVAMVLG DEEK QL+KCDPAGHFFGHKATSAGLKEQEAINFLEKKMK+DP FSYEETVQ A+SALQ Sbjct: 9 YDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQ 203
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 348.977 bits (894), Expect = 2.370e-95 Identity = 165/195 (84.62%), Postives = 185/195 (94.87%), Query Frame = -1 Query: 3 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSALQ 587 YDRHITIFSPEGRLFQVEYAFKAVK ITSIGVRGKDSVCVVTQKKVPDKLLDQ+ VTHLFPITKY+GL+ATG TADARSLV QARN+AAE+RF +GYEMPVD+L++WIADKSQVYTQHAYMRPLGVVAMV+G+DEE GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +P+F+++ETVQTA+SALQ Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQ 203
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.725e-66 Identity = 119/194 (61.34%), Postives = 159/194 (81.96%), Query Frame = -1 Query: 6 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSAL 587 +DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.725e-66 Identity = 119/194 (61.34%), Postives = 159/194 (81.96%), Query Frame = -1 Query: 6 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSAL 587 +DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.725e-66 Identity = 119/194 (61.34%), Postives = 159/194 (81.96%), Query Frame = -1 Query: 6 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSAL 587 +DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.725e-66 Identity = 119/194 (61.34%), Postives = 159/194 (81.96%), Query Frame = -1 Query: 6 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFSYEETVQTAVSAL 587 +DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of DC900336 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 9.734e-57 Identity = 110/195 (56.41%), Postives = 146/195 (74.87%), Query Frame = -1 Query: 6 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFS-YEETVQTAVSAL 587 +DR IT+FSPEGRL+QVEYAFKA ITS+GV GK+ CV++QKKVPDKL+D + V H+FPITK +G + TG+ ADAR+ V +AR+EAAE+ +K GY MP DVL++ +A+ +QV TQ A MRPLGV ++ +D+E GP L+K DPAG + G+KATSAG K+ E IN+LEK+ K D S +TV+T + AL Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQAL 201 The following BLAST results are available for this feature:
BLAST of DC900336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900336 ID=DC900336; Name=DC900336; organism=Citrus sinensis; type=EST; length=950bpback to top |