CX043717

Overview
NameCX043717
Unique NameCX043717
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9479 contig Csv1_Contig9479:952..1808. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CYSZ_CUCMA (Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 1.064e-120
Identity = 212/233 (90.99%), Postives = 224/233 (96.14%), Query Frame = 2
Query:    2 VLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERMIEKNADRLGQVSVSNATRRRLAGSG 700
            VLD+LFILHAEHEMNCSTSAARHLASSGVDV+TAL+GAVGALYGPLHGGANEAVLKML+EIGTV NIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFP EFF VLFAIPRMAGYLAHWRESLDDPDTKI+RPQQVYTG W+RHY+P  ER++   ADRLGQVSVSNA++RRL+GSG
Sbjct:  283 VLDILFILHAEHEMNCSTSAARHLASSGVDVFTALSGAVGALYGPLHGGANEAVLKMLSEIGTVNNIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPPEFFTVLFAIPRMAGYLAHWRESLDDPDTKIIRPQQVYTGEWLRHYIPPNERLVPAKADRLGQVSVSNASKRRLSGSG 515          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY3_ARATH (Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana GN=CSY3 PE=1 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 6.457e-118
Identity = 206/235 (87.66%), Postives = 225/235 (95.74%), Query Frame = 2
Query:    2 VLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERMI---EKNADRLGQVSVSNATRRRLAGS 697
            VLD+LFILHAEHEMNCST+AARHLASSGVDVYTA+AGAVGALYGPLHGGANEAVLKML+EIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVI+ LA+EVFSIVG+DPLIEVAVALEKAALSD+YFVKRKLYPNVDFYSGLIYRAMGFP EFF VLFAIPRMAGYL+HW+ESLDDPDTKIMRPQQVYTGVW+RHY P++ER++    K +D+LGQV+ SNA+RRRLAGS
Sbjct:  273 VLDILFILHAEHEMNCSTAAARHLASSGVDVYTAVAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKNLADEVFSIVGKDPLIEVAVALEKAALSDDYFVKRKLYPNVDFYSGLIYRAMGFPPEFFTVLFAIPRMAGYLSHWKESLDDPDTKIMRPQQVYTGVWLRHYTPVRERIVTDDSKESDKLGQVATSNASRRRLAGS 507          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY2_ARATH (Citrate synthase 2, peroxisomal OS=Arabidopsis thaliana GN=CSY2 PE=2 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 5.466e-117
Identity = 205/234 (87.61%), Postives = 221/234 (94.44%), Query Frame = 2
Query:    2 VLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERMI--EKNADRLGQVSVSNATRRRLAGS 697
            VLD+LFILHAEHEMNCST+AARHLASSGVDVYTA AGAVGALYGPLHGGANEAVLKML EIGT ENIP+FIEGVKNRKRKMSGFGHRVYKNYDPRAKVI+KLA+EVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFP EFF VLFA+PRMAGYL+HWRESLDDPDT+IMRPQQ YTGVWMRHY P++ER +  + + D+ GQVS+SNA+RRRLAGS
Sbjct:  278 VLDILFILHAEHEMNCSTAAARHLASSGVDVYTACAGAVGALYGPLHGGANEAVLKMLAEIGTAENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLADEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPPEFFTVLFAVPRMAGYLSHWRESLDDPDTRIMRPQQAYTGVWMRHYEPVRERTLSSDSDKDKFGQVSISNASRRRLAGS 511          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY1_ARATH (Citrate synthase 1, peroxisomal OS=Arabidopsis thaliana GN=CSY1 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.148e-90
Identity = 160/207 (77.29%), Postives = 184/207 (88.89%), Query Frame = 2
Query:    2 VLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            VLD+LFIL AEHEMNCST+AARHL+SSG DVYTA++G VGA+YGPLHGGA EA + ML+EIGTVENIPEFIE VKN+KR++SGFGHR+YKNYDPR KV++KLA+EVFSI+GRDPL+EV  ALEKAALSDEYFVKRKLYPNVDFYSGLI RAMG P+ F     A+ R+AGYL+HWRESLDDPDTKIMRPQQVYTG  +RHY  ++ER
Sbjct:  275 VLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSF----TAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRER 477          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISYP_DICDI (Citrate synthase, peroxisomal OS=Dictyostelium discoideum GN=cshA PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.224e-85
Identity = 150/227 (66.08%), Postives = 183/227 (80.62%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERMIEKNADRLGQVSVSNATRRR 685
            L++LFILHA+HE+NCST+A RH++SSG D YT++AGA GALYGP HGGANEAVL ML  IG+ ENIP+FI  VK++K+K+ GFGHR+YKNYDPRAK+IR++A EVF  +G++PLIEVA  LEK AL DEYFV RKLYPNVDFYSGLIY+AMGFPT+ FPVLF IPR  G+LAHW E L+DP+TKI RP+QVY G W R+Y+P+  R     A    Q S S+AT +R
Sbjct:  262 LEILFILHADHELNCSTAAMRHISSSGTDPYTSVAGAAGALYGPSHGGANEAVLDMLIHIGSKENIPQFISDVKSKKKKLMGFGHRIYKNYDPRAKIIRRVAYEVFESLGKEPLIEVATELEKQALEDEYFVSRKLYPNVDFYSGLIYKAMGFPTDMFPVLFTIPRAVGWLAHWVEHLEDPETKIYRPRQVYKGEWFRNYVPIDGR---PPAKVRSQDSYSSATTKR 485          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISYC_DICDI (Citrate synthase OS=Dictyostelium discoideum GN=gltA PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.114e-77
Identity = 133/229 (58.08%), Postives = 184/229 (80.35%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKERMIEK--NADRLGQVSVSNATRRR 685
            LD LFI+HA+HE+NCST+  R +AS+ VD YTA AG+ GALYGPLHGGANEAVL+ML  IGT+ENIP+FIE VK +K+++ GFGHRVYK+YDPRAK+++ +  E+F+++G++PL+++A  LE+ ALSD YF++R+LYPNVDFYSG+IY++MGFPT+ FPVLF+IPR AG+LAHW E L DP+ +I RP+Q+Y G    +Y+P+  R +++  + ++L   S S   RRR
Sbjct:  243 LDKLFIIHADHELNCSTATMRQIASTLVDPYTACAGSAGALYGPLHGGANEAVLRMLEAIGTIENIPKFIEQVKQKKQRLMGFGHRVYKSYDPRAKILKTVTMEIFALLGKNPLMQIATELERLALSDSYFIERQLYPNVDFYSGIIYKSMGFPTDMFPVLFSIPRAAGWLAHWVEELADPELRIFRPRQIYMGRRNMNYVPMDARQVQQHNSGEKLSSFS-SGFDRRR 470          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY1_MYCTU (Citrate synthase 1 OS=Mycobacterium tuberculosis GN=gltA2 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.562e-63
Identity = 115/210 (54.76%), Postives = 164/210 (78.10%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEI-GTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFS-IVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            LD+LFILHA+HE NCSTS  R + SS  +++T+++G + AL+GPLHGGAN+AVL+ML  I  + +++ EF+  VKNR+   K+ GFGHRVYKNYDPRA+++++ A+++ + + G D L+ +A  LE+AAL+D+YF++RKLYPNVDFY+GLIYRA+GFPT  F VLFA+ R+ G++AHWRE  D+ D+KI RP+Q+YTG   R Y+ +  R
Sbjct:  222 LDMLFILHADHEQNCSTSTVRLVGSSRANLFTSISGGINALWGPLHGGANQAVLEMLEGIRDSGDDVSEFVRKVKNREAGVKLMGFGHRVYKNYDPRARIVKEQADKILAKLGGDDSLLGIAKELEEAALTDDYFIERKLYPNVDFYTGLIYRALGFPTRMFTVLFALGRLPGWIAHWREMHDEGDSKIGRPRQIYTGYTERDYVTIDAR 431          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY2_RHITR (Citrate synthase, plasmid OS=Rhizobium tropici GN=pcsA PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.935e-63
Identity = 111/210 (52.86%), Postives = 153/210 (72.86%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVG--RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            +D +FILHA+HE N STS  R   SSG + +  +A  +  L+GP HGGANE  L ML EIGTV+ IPE+I   K++    ++ GFGHRVYKNYDPRAK+++K A EV   +G   DPL+++A+ LE+ AL+D+YF+++KLYPNVDFYSG+  +A+GFPT  F VLFA+ R  G++A W E ++DPD +I RP+Q+YTG  +R Y+PL +R
Sbjct:  220 MDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANERALNMLTEIGTVDRIPEYIARAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTAHEVLGELGIKDDPLLDIAIELERIALTDDYFIEKKLYPNVDFYSGITLKALGFPTTMFTVLFALARTVGWIAQWNEMIEDPDQRIGRPRQLYTGAPLREYVPLSKR 429          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY1_RHITR (Citrate synthase, chromosomal OS=Rhizobium tropici GN=ccsA PE=3 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 5.935e-63
Identity = 111/210 (52.86%), Postives = 153/210 (72.86%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVG--RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            +D +FILHA+HE N STS  R   SSG + +  +A  +  L+GP HGGANEA L ML EIGTV+ IPE+I   K++    ++ GFGHRVYKNYDPRAK+++K A EV   +G   DPL+++A+ LE+ AL+D+YF+++KLYPNVDFYSG+  +A+GFPT  F VLFA+ R  G++A W E ++DPD +I RP+ VYTG  +R Y+P+ +R
Sbjct:  220 MDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLTEIGTVDRIPEYIARAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTAHEVLGELGIKDDPLLDIAIELERIALTDDYFIEKKLYPNVDFYSGITLKALGFPTTMFTVLFALARTVGWIAQWNEMIEDPDQRIGRPRHVYTGAPLREYVPVSKR 429          
BLAST of CX043717 vs. ExPASy Swiss-Prot
Match: CISY_BRAJA (Citrate synthase OS=Bradyrhizobium japonicum GN=gltA PE=3 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 1.012e-62
Identity = 115/210 (54.76%), Postives = 150/210 (71.43%), Query Frame = 2
Query:    5 LDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVK--NRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGR--DPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYTGVWMRHYMPLKER 622
            LD +FILHA+HE N STS  R   SSG + +  +A  +  L+GP HGGANEA L ML EIG+V+ IPEFI  VK  N + ++ GFGHRVYKNYDPRAK+++K+   V    G   DP+++VA+ LEK ALSD+YF+ RKLYPNVDFYSG+  +AMGFP   F VLFA+ R  G+++ W E ++DP  KI RP+Q+YTGV  R Y+ +K+R
Sbjct:  224 LDKIFILHADHEQNASTSTVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALAMLAEIGSVDKIPEFIAKVKDKNSEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDQYFIDRKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTGVTRRDYVAIKDR 433          
The following BLAST results are available for this feature:
BLAST of CX043717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
CYSZ_CUCMA1.064e-12090.99Citrate synthase, glyoxysomal OS=Cucurbita maxima ... [more]
CISY3_ARATH6.457e-11887.66Citrate synthase 3, peroxisomal OS=Arabidopsis tha... [more]
CISY2_ARATH5.466e-11787.61Citrate synthase 2, peroxisomal OS=Arabidopsis tha... [more]
CISY1_ARATH1.148e-9077.29Citrate synthase 1, peroxisomal OS=Arabidopsis tha... [more]
CISYP_DICDI4.224e-8566.08Citrate synthase, peroxisomal OS=Dictyostelium dis... [more]
CISYC_DICDI1.114e-7758.08Citrate synthase OS=Dictyostelium discoideum GN=gl... [more]
CISY1_MYCTU1.562e-6354.76Citrate synthase 1 OS=Mycobacterium tuberculosis G... [more]
CISY2_RHITR5.935e-6352.86Citrate synthase, plasmid OS=Rhizobium tropici GN=... [more]
CISY1_RHITR5.935e-6352.86Citrate synthase, chromosomal OS=Rhizobium tropici... [more]
CISY_BRAJA1.012e-6254.76Citrate synthase OS=Bradyrhizobium japonicum GN=gl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13A05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13A05-B9-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043717 ID=CX043717; Name=CX043717; organism=Citrus sinensis; type=EST; length=857bp
TGTGCTGGATGTTCTCTTCATACTACATGCTGAACACGAAATGAATTGCT
CCACATCTGCTGCCCGTCATCTTGCATCAAGTGGTGTTGATGTATATACC
GCACTTGCTGGCGCTGTTGGAGCACTCTATGGTCCTCTTCATGGTGGAGC
CAATGAGGCTGTGCTTAAGATGCTGAATGAGATAGGTACAGTTGAGAATA
TACCCGAGTTCATTGAAGGTGTGAAGAATAGAAAGAGGAAGATGTCAGGT
TTTGGGCACCGCGTATACAAAAACTATGATCCCAGAGCAAAGGTCATTAG
GAAACTAGCAGAGGAAGTATTTTCCATTGTTGGCCGGGATCCTCTTATTG
AGGTTGCTGTTGCTTTGGAGAAGGCTGCACTATCTGATGAGTATTTTGTT
AAGAGGAAGCTATATCCAAATGTTGACTTCTACTCTGGGTTGATATATAG
GGCAATGGGATTTCCAACGGAGTTTTTCCCTGTTCTATTTGCCATCCCAC
GCATGGCTGGGTACTTAGCACACTGGCGAGAGTCCTTGGATGATCCTGAC
ACAAAGATAATGAGACCCCAACAGGTTTATACTGGTGTATGGATGCGACA
TTATATGCCACTCAAAGAGCGGATGATAGAGAAGAATGCAGACAGGCTTG
GACAGGTGTCTGTTTCAAATGCCACAAGACGAAGACTCGCTGGATCAGGG
AATTAAATGTTTTTGGCTTCATGAATAAATATTCAGAGAAGAAAAATAAA
TGACATGAATATTATAAAGAAAAATAATAATTACAGGCCTCTGGTTTTCT
GTTTGAATATCTTCTACAGAAGTAGCAGGTTCATATGTTTTTTGGTTCCT
TGTACTG
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