DC900335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E2_WHEAT (Eukaryotic translation initiation factor 4E-2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.464e-52 Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLVYARGRTNLPYGPRQQQMKLLRW 505 HKL+R+WTFW+D +KPK GAAW +S++K YTFDTVEEFWCLY+QIF+PS+L +ADFHLFK G+EPKWEDPECANGGKW+V S+RK NLDTMWLET MALIGEQFDE EICG + V RQ+Q KL W Sbjct: 33 HKLQRQWTFWYDIQTKPKPGAAWGTSLKKGYTFDTVEEFWCLYDQIFRPSKLVGSADFHLFKAGVEPKWEDPECANGGKWTVISSRKTNLDTMWLETCMALIGEQFDESQEICGVVASV------------RQRQDKLSLW 161 HSP 2 Score: 70.4774 bits (171), Expect = 5.977e-12 Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 415 DLWGVVASVRQRQDKLALWTKTAANEAAQMGIGKKWKEILD 537 ++ GVVASVRQRQDKL+LWTKTA+NEA Q+ IGKKWKE++D Sbjct: 143 EICGVVASVRQRQDKLSLWTKTASNEAVQVDIGKKWKEVID 183
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E2_MAIZE (Eukaryotic translation initiation factor 4E-2 OS=Zea mays PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 8.532e-51 Identity = 86/123 (69.92%), Postives = 103/123 (83.74%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLVYARG 451 HKL R+WTFW+D +K K GAAW +S++K YTFDTVEEFW +Y+QIF+PS+L NADFHLFK G+EPKWEDPECANGGKW+V NRKA +TMWLET+MALIGEQFDE ++ICG + V ARG Sbjct: 40 HKLHRQWTFWYDIQTKTKSGAAWGTSLKKAYTFDTVEEFWSMYDQIFRPSKLSGNADFHLFKAGVEPKWEDPECANGGKWTVPCNRKATFETMWLETLMALIGEQFDETEDICGIVASVRARG 162
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E2_ORYSJ (Eukaryotic translation initiation factor 4E-2 OS=Oryza sativa subsp. japonica GN=Os10g0467600 PE=2 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 2.482e-50 Identity = 86/123 (69.92%), Postives = 102/123 (82.93%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLVYARG 451 HKL R+W FW+D SKPK GAAW +S+RK YTFDTVEEFW LY+QIF+PS++ +NADFHLFK G+EPKWEDPECANGGKW+V +RK L+ MWLET+MALIGEQFDE +EICG + V RG Sbjct: 30 HKLHRQWAFWYDIQSKPKPGAAWGTSLRKAYTFDTVEEFWGLYDQIFRPSKVTVNADFHLFKAGVEPKWEDPECANGGKWTVPCSRKTTLENMWLETLMALIGEQFDESEEICGVVASVRQRG 152 HSP 2 Score: 68.1662 bits (165), Expect = 2.967e-11 Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 415 DLWGVVASVRQRQDKLALWTKTAANEAAQMGIGKKWKEILD 537 ++ GVVASVRQR DKLALWT+TA+NEA Q+ IGKKWKEI+D Sbjct: 140 EICGVVASVRQRGDKLALWTRTASNEAVQVNIGKKWKEIVD 180
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 6.760e-48 Identity = 94/160 (58.75%), Postives = 113/160 (70.62%), Query Frame = 2 Query: 71 QSQLHKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWS--VTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLVYARGRTNLPYGPRQQQMKLLRWALERSGRRSLMSL 544 + Q HKLERKW+FWFDN SK +GAAW +S+RK YTFDTVE+FW L+E IF+ S+L NA+ HLFK G+EPKWEDPECANGGKW+ VT+NRK LD WLET+MALIGEQFDE DEICG + V P+ +Q KL W +S LM + Sbjct: 22 EKQPHKLERKWSFWFDNQSK--KGAAWGASLRKAYTFDTVEDFWGLHETIFQTSKLTANAEIHLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDEADEICGVVASV----------RPQSKQDKLSLWTRTKSNEAVLMGI 169
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.026e-44 Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELL 433 H LE WTFWFDN + + +W SS+R V+TF TVEEFW LY + PS+L ADF+ FK IEPKWEDP CANGGKW++T ++ + D WL T++ALIGEQFD DEICG ++ Sbjct: 60 HPLEHSWTFWFDNPAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYCFKHIIEPKWEDPICANGGKWTMTFPKEKS-DKSWLYTLLALIGEQFDHGDEICGAVV 175 HSP 2 Score: 56.6102 bits (135), Expect = 1.026e-44 Identity = 22/43 (51.16%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 409 G*DLWGVVASVRQRQDKLALWTKTAANEAAQMGIGKKWKEILD 537 G ++ G V ++R +Q+++++WTK A+NEAAQ+ IGK+WKE LD Sbjct: 167 GDEICGAVVNIRGKQERISIWTKNASNEAAQVSIGKQWKEFLD 209
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.413e-37 Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = 2 Query: 65 PPQSQLHKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLV 439 P H LE WTFWFDN + AAW SS+R ++TF TVEEFW LY I PS+L + ADFH FK IEPKWEDP CANGGKW+++ R DT WL T++A+IGEQFD DEICG ++ V Sbjct: 37 PSPPATHPLEHSWTFWFDNPQSKSKQAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHCFKNKIEPKWEDPICANGGKWTISCGR-GKSDTFWLHTLLAMIGEQFDYGDEICGAVVSV 160
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.148e-37 Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = 2 Query: 65 PPQSQL---HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLV 439 PPQ+ H LE WTFWFDN + A W SS+R ++TF TVE+FW LY I PS+L + ADFH FK IEPKWEDP CANGGKW+ + R DTMWL T++A+IGEQFD DEICG ++ V Sbjct: 43 PPQANPAAPHPLEHAWTFWFDNPQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVGADFHCFKNKIEPKWEDPICANGGKWTFSCGR-GKSDTMWLHTLLAMIGEQFDYGDEICGAVVSV 169
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 4.545e-36 Identity = 71/154 (46.10%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLVYARGRTNLPYGPRQQQMKLLRWALERSGRRSLMSL 544 H LE WTFWFDN + AW S++ ++TF TVE+FW LY I PS+L + ADFH FK IEPKWEDP CANGGKW+++ R DT WL T++A+IGEQFD DEICG ++ V RQ+Q ++ W + + +S+ Sbjct: 40 HPLENAWTFWFDNPQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFKNKIEPKWEDPICANGGKWTISCGR-GKSDTFWLHTLLAMIGEQFDFGDEICGAVVSV------------RQKQERVAIWTKNAANEAAQISI 180
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E4_ARATH (Putative eukaryotic translation initiation factor 4E-4 OS=Arabidopsis thaliana GN=At1g29550 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.572e-35 Identity = 67/123 (54.47%), Postives = 81/123 (65.85%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLVYARG 451 H + WTFWFDN S W SS+R +YTF T+EEFW LY I P++ AD + FK IEPKWEDP CANGGKWS+ KA L+ WL T++AL+GEQFD+ DEICG +L ARG Sbjct: 65 HCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFGTIEEFWSLYNNIHPPTKWVSGADLYCFKDKIEPKWEDPICANGGKWSMMF-PKATLECNWLNTLLALVGEQFDQGDEICGAVLNFRARG 186
BLAST of DC900335 vs. ExPASy Swiss-Prot
Match: IF4E5_ARATH (Eukaryotic translation initiation factor 4E-5 OS=Arabidopsis thaliana GN=At1g29590 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.238e-33 Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 2 Query: 83 HKLERKWTFWFDNISKPKQGAAWXSSMRKVYTFDTVEEFWCLYEQIFKPSRLPMNADFHLFKTGIEPKWEDPECANGGKWSVTSNRKANLDTMWLETMMALIGEQFDEVDEICGELLLVYARG 451 H + WTFWFDN S W SS+R +YTF T+EEFW LY I P++ +D + FK IEPKWEDP CANGGKW++ R A L++ WL T++AL+GEQFD+ DEICG +L RG Sbjct: 65 HCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFATIEEFWSLYNNIHPPTKWVSGSDLYCFKDKIEPKWEDPICANGGKWTMFFPR-ATLESNWLNTLLALVGEQFDQGDEICGAVLNFRTRG 186 The following BLAST results are available for this feature:
BLAST of DC900335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900335 ID=DC900335; Name=DC900335; organism=Citrus sinensis; type=EST; length=545bpback to top |