DC900333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG2_ORYSJ (Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.955e-40 Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 3 Query: 3 SIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMIHEIVASG 305 S+ P+ ERVDEYGLG RESLAEAVSAVI +LGMQPCEGT+VV +NSRSHTCLLSGVFIGNVKVLVRL FG+ GPKEVAMKLAVRS+D +SD IHEIVA+G Sbjct: 789 SMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSHTCLLSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDDPEISDKIHEIVANG 889
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG1_ORYSJ (Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica GN=Os03g0227000 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 9.702e-40 Identity = 82/101 (81.19%), Postives = 90/101 (89.11%), Query Frame = 3 Query: 3 SIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMIHEIVASG 305 ++ P+ ERVDEYGLG RESLAEAVSAVIS+LGMQPCEGTEVV N+RSHTCLLSGVFIG+ KVLVRL FG+ GPKEVAMKLAVRS+D VSD IHEIVASG Sbjct: 784 NMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSHTCLLSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDDPEVSDKIHEIVASG 884
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG_ARATH (Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.357e-33 Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 3 Query: 3 SIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMIHEIVASG 305 S+ + ERVDEYGLG RESL EAV AV+ LLGMQ CEGTE + N+RSHTCLLSGV+IGNVKVLVR QFG+D K++AMKL VR+ED +V++ IHEIVASG Sbjct: 786 SMDEEDERVDEYGLGQRESLGEAVKAVMDLLGMQTCEGTETIPLNARSHTCLLSGVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAEDVSVAEAIHEIVASG 886
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG2_DANRE (Coatomer subunit gamma-2 OS=Danio rerio GN=copg2 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 6 IGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 284 +G + E+ + + L +L EAV+ ++S LGMQPCE ++ V N SH L+GVF G VLVR + + DG V +++ VRS DDNV D+I Sbjct: 778 VGDECEKEETFALATVRTLDEAVNNIVSFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLALADG---VTIQVTVRSTDDNVVDVI 868
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG2_TAKRU (Coatomer subunit gamma-2 OS=Takifugu rubripes GN=copg2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 6 IGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 284 +G +FE+ + + L +L EAV +IS LGMQPCE ++ V N SH L+GVF G VLVR + + DG V M++ VRS ++ V D+I Sbjct: 778 VGDEFEKEETFALASVRTLDEAVGNIISFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLALADG---VTMQVTVRSSEETVVDVI 868
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG2_XENTR (Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=copg2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.907e-11 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 6 IGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 284 IG +E+ + + L +SL EAV+ +I LGMQPCE ++ V N SH LSGV+ G VLVR + + DG V M++ VRS+D+ +++I Sbjct: 777 IGDTYEKEETFALTTTKSLEEAVNNIIKFLGMQPCERSDKVPENKNSHVLYLSGVYRGGHDVLVRSRLALADG---VTMQVTVRSQDETPANVI 867
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG2_XENLA (Coatomer subunit gamma-2 OS=Xenopus laevis GN=copg2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 6 IGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 284 +G +E+ + + L ++L EAV+ +I LGMQPCE ++ V N SH LSGVF G LVR + + DG V M++ VRS+D+ +D+I Sbjct: 777 VGDAYEKEETFALTTTKTLEEAVNNIIKFLGMQPCERSDKVPENKNSHVLYLSGVFRGGHDALVRSRLALADG---VTMQVTVRSQDETPADVI 867
BLAST of DC900333 vs. ExPASy Swiss-Prot
Match: COPG2_HUMAN (Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11 Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 6 IGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 284 +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH+ L+G+F G +LVR + + DG V M++ VRS++ D+I Sbjct: 776 VGDTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGIFRGGYDLLVRSRLALADG---VTMQVTVRSKERTPVDVI 866 The following BLAST results are available for this feature:
BLAST of DC900333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900333 ID=DC900333; Name=DC900333; organism=Citrus sinensis; type=EST; length=749bpback to top |