CX043704

Overview
NameCX043704
Unique NameCX043704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.777e-73
Identity = 128/171 (74.85%), Postives = 147/171 (85.96%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYS-GNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYDKSYSSAIKSSV 512
            W+++LGGQS++RPLGDAVLDGIDFDIEGG+ Q+WDELA+ LS FSQQ+KVYL AAPQCP+PD WL GAL TGLFDYVWVQFYNNPPCQYS G+ADNLKN WNQW  N   +G++FLGLPA+  AAGSG+IP DVL SQVLP I  SPKYGGVMLWS+ YD  YSSAIK++V
Sbjct:  123 WNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHWDELAKTLSQFSQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQW--NAIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYDNGYSSAIKANV 291          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 4.097e-70
Identity = 127/178 (71.35%), Postives = 152/178 (85.39%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQY-SGNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYD--KSYSSAIKSSV*TIH 524
            W++FLGG+SSSRPLGDAVLDGIDFDIE GS  YWD+LAR LS +S+Q KKVYL AAPQCP+PD +LG AL TGLFDYVWVQFYNNPPCQY SGN +N+ NSWN+WT++++ +G++FLGLPA+PEAAGSGY+PPDVL S++LP IK SPKYGGVMLWS+ YD    YSS+I  SV  +H
Sbjct:  127 WNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSIN-AGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSVLFLH 303          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIE_BETVU (Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.240e-67
Identity = 122/171 (71.35%), Postives = 140/171 (81.87%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQ-QKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYDKSYSSAIKSSV 512
            W+ +LGGQSS+RPLGDAVLDGIDFDIE G  ++WD+LARAL+  +  QK VYL+AAPQCP PDA L  A+ TGLFDYVWVQFYNNPPCQY  +ADNL +SWNQWT+    + Q+FLGLPAS +AAGSG+IP D LTSQVLP IK S KYGGVMLWS+ YD  YSSAIKSSV
Sbjct:  125 WNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLARALAGHNNGQKTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLLSSWNQWTT--VQANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYDSGYSSAIKSSV 293          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 4.688e-66
Identity = 125/177 (70.62%), Postives = 143/177 (80.79%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ----KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQY-SGNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYD--KSYSSAIKSSV 512
            W++FLGGQSSSRPLGDAVLDGIDFDIE GS  +WD+LARALS    Q    +KVYL AAPQCP+PD   G AL TGLFDYVWVQFYNNPPCQY SGN +NL NSWN+WTS+++ +G  F+GLPAS  AAG G+IP +VLTSQ+LP IK SPKYGGVMLWS+ YD    YSS+IKSSV
Sbjct:  126 WNNFLGGQSSSRPLGDAVLDGIDFDIELGSTLHWDDLARALSRIEFQQERGRKVYLTAAPQCPFPDKVPGTALNTGLFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRWTSSINSTGS-FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIKSSV 301          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIA_ARATH (Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.178e-63
Identity = 116/174 (66.67%), Postives = 142/174 (81.61%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYS-GNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYD--KSYSSAIKSSV 512
            W++FLGG+SSSRPLGDAVLDGIDF+IE GS Q+WD+LAR LS FS + +K+YL  APQCP+PD  +G AL T  FDYVW+QFYNNPPC YS GN  NL +SWN+WT++++   + FLGLPA+PEAAGSGYIPPDVLTSQ+LP +K S KYGGVMLWS+ +D    YSS+I +SV
Sbjct:  130 WNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQ-KFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSILASV 302          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.005e-62
Identity = 126/174 (72.41%), Postives = 141/174 (81.03%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYS-GNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGS-GYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYD--KSYSSAIKSSV 512
            W++FLGG S+SRPLGDAVLDGIDFDIE G  Q++DELA+AL+ FSQQK VYL+AAPQCPYPDA L  A+ TGLFDYVWVQFYNNP CQYS GN +NL N+WNQWTS  S + QVFLG+PAS  AA S G IP DVLTSQVLPAIK SPKYGGVM+W R  D    YS+AIK SV
Sbjct:  124 WNNFLGGTSTSRPLGDAVLDGIDFDIESGG-QHYDELAKALNGFSQQK-VYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTS--SQAKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIKGSV 293          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIA_PHAAN (Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.020e-60
Identity = 117/173 (67.63%), Postives = 135/173 (78.03%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQY-SGNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYD--KSYSSAIKSSV 512
            W++FLGGQSSSRPLGDA+LDG+DFDIE G+ ++WD+LARAL  F+ Q  + L AAPQCP PDA L  A+ TGLFD VWVQFYNNPPCQY SGN ++L +SWNQWTS  S + Q+FLG+PAS  AAGSG+IP DVLTSQVLP IK S KYGGVMLW R  D    YS AI  SV
Sbjct:  130 WNNFLGGQSSSRPLGDAILDGVDFDIESGTGEHWDDLARALKGFNSQ--LLLTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTNDLISSWNQWTS--SQAKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAIIGSV 298          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.046e-57
Identity = 108/171 (63.16%), Postives = 130/171 (76.02%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGS-GYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYDKSYSSAIKSSV 512
            W+ +LGGQS SRPLG AVLDG+DFDIE GS Q+WD LA+ L NF Q   V L+AAPQCP PDA L  A+ TGLFD VWVQFYNNPPC ++ NADNL +SWNQWT+    + ++++GLPA+ EAA S G+IP DVL SQVLP IK S  YGGVMLWS+ +D  YS +IK S+
Sbjct:  126 WNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQELKNFGQ---VILSAAPQCPIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTA--FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFDNGYSDSIKGSI 291          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHIB_TOBAC (Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.744e-56
Identity = 110/173 (63.58%), Postives = 131/173 (75.72%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNLKNSWNQWTSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLWSRQYDK--SYSSAIKSSV 512
            W++FLGGQSS RPLGDAVLDGIDFDIE G   Y   LAR LS   QQ KK+YL AAPQCP+PD  L GAL TGLFDYVWVQFYNNP C++  N++N K  WNQWTS    + ++++GLPA+  AAG+GYIP  VL SQVLP +K S KYGGVMLW+R++D    YSSAI+ +V
Sbjct:  125 WNNFLGGQSSFRPLGDAVLDGIDFDIELGQPHYI-ALARRLSEHGQQGKKLYLTAAPQCPFPDKLLNGALQTGLFDYVWVQFYNNPECEFMSNSENFKRRWNQWTS--IPAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIRGAV 294          
BLAST of CX043704 vs. ExPASy Swiss-Prot
Match: CHI1_RHIOL (Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.275e-28
Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 3
Query:    3 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARAL-SNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNLKNSWNQW--TSNLSGSGQVFLGLPASPEAAGSGYIPPDVLTSQVLPAIKNSPKYGGVMLW 464
            W+ F GG S +RP GDAV+DG+D DIEGG++  +     AL   FS      + AAPQCP+PDA LG  L +  FDYV VQFYNN  C  +G++ N  ++W+ W  T++ + + ++   +P SP AAGSGY+P   L + V         YGGV +W
Sbjct:  140 WNLFGGGSSDTRPFGDAVIDGVDLDIEGGASTGYAAFVNALRQKFSSN--FLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN-YCSATGSSFNF-DTWDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVW 292          
The following BLAST results are available for this feature:
BLAST of CX043704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CHIA_TOBAC1.777e-7374.85Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=... [more]
CHLY_HEVBR4.097e-7071.35Hevamine-A OS=Hevea brasiliensis PE=1 SV=2[more]
CHIE_BETVU4.240e-6771.35Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 P... [more]
CHIT3_VITVI4.688e-6670.62Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE... [more]
CHIA_ARATH2.178e-6366.67Acidic endochitinase OS=Arabidopsis thaliana GN=CH... [more]
CHIA_CICAR7.005e-6272.41Acidic endochitinase OS=Cicer arietinum PE=2 SV=1[more]
CHIA_PHAAN5.020e-6067.63Acidic endochitinase OS=Phaseolus angularis PE=2 S... [more]
CHIA_CUCSA3.046e-5763.16Acidic endochitinase OS=Cucumis sativus PE=1 SV=1[more]
CHIB_TOBAC5.744e-5663.58Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1[more]
CHI1_RHIOL2.275e-2843.31Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12H10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H10-O20-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043704 ID=CX043704; Name=CX043704; organism=Citrus sinensis; type=EST; length=650bp
TGTGGGACCATTTTCTTGGAGGCCAATCAAGCTCCCGGCCATTAGGTGAT
GCAGTTTTAGATGGAATCGATTTCGATATTGAGGGAGGCTCAAACCAATA
CTGGGACGAACTAGCCAGGGCCTTGTCAAATTTTAGCCAACAGAAGAAGG
TTTACTTAGCAGCAGCTCCACAATGTCCGTACCCTGATGCATGGCTTGGC
GGTGCACTAGGAACTGGCTTATTTGATTACGTTTGGGTCCAATTCTATAA
CAATCCTCCTTGTCAGTATTCCGGCAATGCGGATAATCTCAAGAACAGTT
GGAATCAATGGACATCAAATCTATCTGGTTCTGGCCAAGTATTTTTGGGA
TTGCCAGCGTCTCCTGAAGCAGCCGGGAGCGGCTATATTCCCCCTGATGT
GCTTACATCTCAGGTTCTGCCGGCTATTAAGAATTCCCCAAAATACGGAG
GAGTCATGCTCTGGTCTAGGCAGTATGACAAGAGTTATAGCTCAGCTATT
AAATCCAGTGTTTGAACCATACACCATATTACCTGAGAATATTTTCTTCA
CCTTAAAATAATTAATAAATCTACATGAAATAAGAATATTGTATAATCAC
ACGCAATAAATTTAGAGCAATAGCTTTGGCATGTAAAAAAAAAAAAAAAA
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