CX043703

Overview
NameCX043703
Unique NameCX043703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.840e-71
Identity = 124/171 (72.51%), Postives = 142/171 (83.04%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYS-GNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYDKSYSSAIKSSV 649
            W+++LGGQS++RPLGDAVLDGIDFDIEGG+ Q+WDELA+ LS FSQQ+KVYL AAPQCP+PD WL GAL TGLFDYVWVQFYNNPPCQYS G+ADN KN WNQW  N    G++FLGLP +  AAGSG+IP DVL  QVLP I  SPKYGGVMLW + YD  YSSAIK++V
Sbjct:  123 WNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHWDELAKTLSQFSQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQW--NAIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYDNGYSSAIKANV 291          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.457e-67
Identity = 124/178 (69.66%), Postives = 146/178 (82.02%), Query Frame = -2
Query:  128 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQY-SGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYD--KSYSSAIKSSV*TIH 649
            W++FLGG+SSSRPLGDAVLDGIDFDIE GS  YWD+LAR LS +S+Q KKVYL AAPQCP+PD +LG AL TGLFDYVWVQFYNNPPCQY SGN +N  NSWN+WT+++   G++FLGLP +PEAAGSGY+PPDVL  ++LP IK SPKYGGVMLW + YD    YSS+I  SV  +H
Sbjct:  127 WNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSI-NAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSVLFLH 303          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIE_BETVU (Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.508e-64
Identity = 118/171 (69.01%), Postives = 135/171 (78.95%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQ-QKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYDKSYSSAIKSSV 649
            W+ +LGGQSS+RPLGDAVLDGIDFDIE G  ++WD+LARAL+  +  QK VYL+AAPQCP PDA L  A+ TGLFDYVWVQFYNNPPCQY  +ADN  +SWNQWT+      Q+FLGLP S +AAGSG+IP D LT QVLP IK S KYGGVMLW + YD  YSSAIKSSV
Sbjct:  125 WNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLARALAGHNNGQKTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLLSSWNQWTT--VQANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYDSGYSSAIKSSV 293          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 6.336e-63
Identity = 121/177 (68.36%), Postives = 137/177 (77.40%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ----KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQY-SGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYD--KSYSSAIKSSV 649
            W++FLGGQSSSRPLGDAVLDGIDFDIE GS  +WD+LARALS    Q    +KVYL AAPQCP+PD   G AL TGLFDYVWVQFYNNPPCQY SGN +N  NSWN+WTS++   G  F+GLP S  AAG G+IP +VLT Q+LP IK SPKYGGVMLW + YD    YSS+IKSSV
Sbjct:  126 WNNFLGGQSSSRPLGDAVLDGIDFDIELGSTLHWDDLARALSRIEFQQERGRKVYLTAAPQCPFPDKVPGTALNTGLFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRWTSSINSTGS-FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIKSSV 301          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIA_ARATH (Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.725e-60
Identity = 112/174 (64.37%), Postives = 137/174 (78.74%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQY-SGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYD--KSYSSAIKSSV 649
            W++FLGG+SSSRPLGDAVLDGIDF+IE GS Q+WD+LAR LS FS + +K+YL  APQCP+PD  +G AL T  FDYVW+QFYNNPPC Y SGN  N  +SWN+WT+++    + FLGLP +PEAAGSGYIPPDVLT Q+LP +K S KYGGVMLW + +D    YSS+I +SV
Sbjct:  130 WNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSI-AAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSILASV 302          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.492e-59
Identity = 121/174 (69.54%), Postives = 136/174 (78.16%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYS-GNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGS-GYIPPDVLTFQVLPAIKNSPKYGGVMLW--FRQYDKSYSSAIKSSV 649
            W++FLGG S+SRPLGDAVLDGIDFDIE G  Q++DELA+AL+ FSQQK VYL+AAPQCPYPDA L  A+ TGLFDYVWVQFYNNP CQYS GN +N  N+WNQWTS+     QVFLG+P S  AA S G IP DVLT QVLPAIK SPKYGGVM+W  F      YS+AIK SV
Sbjct:  124 WNNFLGGTSTSRPLGDAVLDGIDFDIESGG-QHYDELAKALNGFSQQK-VYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTSS--QAKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIKGSV 293          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIA_PHAAN (Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.332e-57
Identity = 112/173 (64.74%), Postives = 130/173 (75.14%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQY-SGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW--FRQYDKSYSSAIKSSV 649
            W++FLGGQSSSRPLGDA+LDG+DFDIE G+ ++WD+LARAL  F+ Q  + L AAPQCP PDA L  A+ TGLFD VWVQFYNNPPCQY SGN ++  +SWNQWTS+     Q+FLG+P S  AAGSG+IP DVLT QVLP IK S KYGGVMLW  F      YS AI  SV
Sbjct:  130 WNNFLGGQSSSRPLGDAILDGVDFDIESGTGEHWDDLARALKGFNSQ--LLLTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTNDLISSWNQWTSS--QAKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAIIGSV 298          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.671e-55
Identity = 105/171 (61.40%), Postives = 126/171 (73.68%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGS-GYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYDKSYSSAIKSSV 649
            W+ +LGGQS SRPLG AVLDG+DFDIE GS Q+WD LA+ L NF Q   V L+AAPQCP PDA L  A+ TGLFD VWVQFYNNPPC ++ NADN  +SWNQWT+  F   ++++GLP + EAA S G+IP DVL  QVLP IK S  YGGVMLW + +D  YS +IK S+
Sbjct:  126 WNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQELKNFGQ---VILSAAPQCPIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTA--FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFDNGYSDSIKGSI 291          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIB_TOBAC (Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.351e-55
Identity = 109/173 (63.01%), Postives = 128/173 (73.99%), Query Frame = -2
Query:  140 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYDK--SYSSAIKSSV 649
            W++FLGGQSS RPLGDAVLDGIDFDIE G   Y   LAR LS   QQ KK+YL AAPQCP+PD  L GAL TGLFDYVWVQFYNNP C++  N++NFK  WNQWTS      ++++GLP +  AAG+GYIP  VL  QVLP +K S KYGGVMLW R++D    YSSAI+ +V
Sbjct:  125 WNNFLGGQSSFRPLGDAVLDGIDFDIELGQPHYI-ALARRLSEHGQQGKKLYLTAAPQCPFPDKLLNGALQTGLFDYVWVQFYNNPECEFMSNSENFKRRWNQWTS--IPAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIRGAV 294          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHI1_RHIOL (Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.742e-28
Identity = 70/157 (44.59%), Postives = 93/157 (59.24%), Query Frame = -2
Query:  188 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARAL-SNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQW--TSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW 649
            W+ F GG S +RP GDAV+DG+D DIEGG++  +     AL   FS      + AAPQCP+PDA LG  L +  FDYV VQFYNN  C  +G++ NF ++W+ W  T++     ++   +PGSP AAGSGY+P   L   V         YGGV +W
Sbjct:  140 WNLFGGGSSDTRPFGDAVIDGVDLDIEGGASTGYAAFVNALRQKFSSN--FLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN-YCSATGSSFNF-DTWDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVW 292          
The following BLAST results are available for this feature:
BLAST of CX043703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CHIA_TOBAC4.840e-7172.51Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=... [more]
CHLY_HEVBR1.457e-6769.66Hevamine-A OS=Hevea brasiliensis PE=1 SV=2[more]
CHIE_BETVU1.508e-6469.01Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 P... [more]
CHIT3_VITVI6.336e-6368.36Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE... [more]
CHIA_ARATH1.725e-6064.37Acidic endochitinase OS=Arabidopsis thaliana GN=CH... [more]
CHIA_CICAR2.492e-5969.54Acidic endochitinase OS=Cicer arietinum PE=2 SV=1[more]
CHIA_PHAAN2.332e-5764.74Acidic endochitinase OS=Phaseolus angularis PE=2 S... [more]
CHIA_CUCSA1.671e-5561.40Acidic endochitinase OS=Cucumis sativus PE=1 SV=1[more]
CHIB_TOBAC6.351e-5563.01Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1[more]
CHI1_RHIOL1.742e-2844.59Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12H10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H10-O20-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043703 ID=CX043703; Name=CX043703; organism=Citrus sinensis; type=EST; length=650bp
TTTTTTTTTTTTTTTTTACATGCCAAAGCTATTGCTCTAAATTTATTGCG
TGTGATTATACAATATTCTTATTTCATGTAAATTTATTAATTATTTTAAG
GTGAAAAAAATATTCTCAGGTAATATGGTGTATGGTTCAAACACTGGATT
TAATAGCTGAGCTATAACTCTTGTCATACTGCCTAAACCAAAGCATGACT
CCTCCGTATTTTGGGGAATTCTTAATAGCCGGCAAAACCTGAAATGTAAG
CACATCAGGGGGAATATAGCCGCTCCCGGCTGCTTCAGGAGACCCTGGCA
ATCCCAAAAATACTTGGCCAAAACCAAATAGATTTGATGTCCATTGATTC
CAACTGTTCTTGAAATTATCCGCATTGCCGGAATACTGACAAGGAGGATT
GTTATAGAATTGGACCCAAACGTAATCAAATAAGCCAGTTCCTAGTGCAC
CGCCAAGCCATGCATCAGGGTACGGACATTGTGGAGCTGCTGCTAAGTAA
ACCTTCTTCTGTTGGCTAAAATTTGACAAGGCCCTGGCTAGTTCGTCCCA
GTATTGGTTTGAGCCTCCCTCAATATCGAAATCGATTCCATCTAAAACTG
CATCACCTAAGGGCCGGGAGCTTGATTGGCCTCCAAGAAAATGGTCCCAC
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