CX043700

Overview
NameCX043700
Unique NameCX043700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.606e-42
Identity = 92/175 (52.57%), Postives = 119/175 (68.00%), Query Frame = -3
Query:  282 VSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQL---GKTGGYVEHANASDEQKLM----VKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQF 785
            VSGYWKATGTDKAI+ GS  +GVKKALVFYKGRPPKGIKTDWIMHEYRL+D  +   K NGSM+LD+WVLCRIYKKR  G+  +L+    E +  +D++    +T   V  A    E+++M    +K PRTCSLAHL+E++Y  P+S +  DN   F++  Q    ++   D QF
Sbjct:   86 VSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR--GASKLLN----EQEGFMDEVLMEDETKVVVNEAERRTEEEIMMMTSMKLPRTCSLAHLLEMDYMGPVSHI--DNFSQFDHLHQPDSESSWFGDLQF 252          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.291e-25
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = -3
Query:  528 SGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 782
            SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  + V D
Sbjct:   92 SGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQKQVYD 172          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.632e-24
Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = -3
Query:  540 SGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 782
            SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  +
Sbjct:   92 SGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQTSAQK 168          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.092e-24
Identity = 58/90 (64.44%), Postives = 65/90 (72.22%), Query Frame = -3
Query:  540 SGYWKATGTDKAIY----GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLND--PTR--QPYKHNGSMKLDDWVLCRIYKK-RQTGSR 782
            SGYWKATGTDK +     GGSK +GVKKALVFY G+PPKG+K+DWIMHEYRL D  PT          S++LDDWVLCRIYKK   T SR
Sbjct:   95 SGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASR 184          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.075e-23
Identity = 56/113 (49.56%), Postives = 70/113 (61.95%), Query Frame = -3
Query:  444 SGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDE 782
            SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WIMHEYRL + +R     +GS KLDDWVLCRIYKK     R      V   Q+C ++    G     ++  D+
Sbjct:   92 SGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRS----HGSSKLDDWVLCRIYKKTSGSQRQA----VTPVQACREEHSTNGSSSSSSSQLDD 196          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = -3
Query:  528 GYWKATGTDKAIY--GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 779
            GYWKATG DK +   G ++ +G+KKALVFY G+ P+G+KTDWIMHEYRL D  R P    GS KLD+WVLCR+Y K+    +  L+
Sbjct:  100 GYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKLE 185          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.440e-22
Identity = 51/81 (62.96%), Postives = 58/81 (71.60%), Query Frame = -3
Query:  540 SGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 782
            SGYWKATG DK I G  K +G+KKALVFY G+ PKG KT+WIMHEYRL D  R   K   S++LDDWVLCRIY K+    R
Sbjct:   85 SGYWKATGADKPI-GLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.909e-21
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = -3
Query:  480 SGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRL-NDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKT 782
            SGYWKATG DK +    +  G+KKALVFY G+PP+G+KT+WIMHEYRL            G+++LDDWVLCR+Y K+    +     + EE  +     G+T
Sbjct:   95 SGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEKMQSRKEEEEAMAAAQSWGET 196          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.909e-21
Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = -3
Query:  555 SGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR 782
            SGYWKATG DK + G  K + +KKALVFY G+ PKG KT+WIMHEYRL D  R   K N S++LDDWVLCRIY K+
Sbjct:   87 SGYWKATGADKPV-GSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKN-SLRLDDWVLCRIYNKK 160          
BLAST of CX043700 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.374e-21
Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = -3
Query:  549 SGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKH-NGSMKLDDWVLCRIYKKRQT 782
            +GYWKATG DK I G  K LG+KKALVFY G+ PKGIKT+WIMHEYRL +  R    +   +++LDDWVLCRIY K+ T
Sbjct:  128 TGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGT 205          
The following BLAST results are available for this feature:
BLAST of CX043700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
NAC29_ARATH8.606e-4252.57NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC19_ARATH4.291e-2563.53NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH3.632e-2464.20NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC18_ARATH8.092e-2464.44NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC72_ARATH3.075e-2349.56NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC68_ORYSJ5.245e-2355.81NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC2_ARATH4.440e-2262.96NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC67_ORYSJ4.909e-2146.08NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC48_ORYSJ4.909e-2164.47NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NA102_ARATH8.374e-2162.03NAC domain-containing protein 102 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12H07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H07-O14-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043700 ID=CX043700; Name=CX043700; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTGTTCTGAAATCTGGATCATTAATTTACTGAAAC
TTACTCCACAATCAGTGTAACATATATATGTTCCCAAAACCAATTTTCAC
GATTCTTGGTTAAAAATATATCTAACAAACCAATTTATATCATCTTTTTT
GTTTTTTTTGTTTTTTCGAAAATCCAAAATCACTGAAATTCGTACACCGT
TGGGTTCACAAACAATGACTGCTGGTTTAACGAGTCACTGTGGTTCACTT
GGTGCATGTCACTTGGCTGAAGTTTATTCTCGAATTGGTCATCGGAGGCA
GCATTATTGTTAATGCCGTTCTGGAAATCATAGTTAAAATTGTAAGTGTT
GTCATTGAGAAGTTGTGAAATCGGAGCAAAGTATTCCAGTTCCACTAGAT
GAGCAAGTGAACATGTCCTTGGAAATTTCACCATCAATTTCTGTTCATCA
CTAGCATTAGCATGCTCAACATAGCCTCCTGTTTTGCCTAATTGATCAAC
ACATGATTGATCTTCCTCGACTTTTGCATCCAAAACTGATCTTGATCCCG
TTTGCCTCTTTTTGTAAATCCTACAAAGTACCCAATCATCCAGTTTCATG
GAACCATTATGTTTGTAGGGTTGTCTTGTTGGGTCATTTAGCCGATATTC
ATGCATGATCCAATCAGTCTTGATCCCCTTGGGGGGCCTGCCCTTATAAA
AAACAAGAGCTTTCTTGACACCAAGATATTTAGACCCACCATATATTGCC
TTATCAGTCCCCGTGGCCTTCCAATATCCCGATACAGTTG
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