CX043697

Overview
NameCX043697
Unique NameCX043697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043697 vs. ExPASy Swiss-Prot
Match: LEUNG_ARATH (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.431e-36
Identity = 70/88 (79.55%), Postives = 79/88 (89.77%), Query Frame = 3 
Query:  174 MAQGNWEADKMLDVYIHDYFLKRKLHASAKAFMTEGKVATDPVAIDAPGGFLFEWWSVFWDIFISRTNDKHSENAAAYIETQQIKTRE 437
            M+Q NWEADKMLDVYIHDY +KR L A+A+AF  EGKV++DPVAIDAPGGFLFEWWSVFWDIFI+RTN+KHSE AA+YIETQ IK RE
Sbjct:    1 MSQTNWEADKMLDVYIHDYLVKRDLKATAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQMIKARE 88
The following BLAST results are available for this feature:
BLAST of CX043697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEUNG_ARATH1.431e-3679.55Transcriptional corepressor LEUNIG OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_12H04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H04-O8-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043697 ID=CX043697; Name=CX043697; organism=Citrus sinensis; type=EST; length=791bp
ATGCTTTTCATTTAGTTTCTCTTTCTTTCAGTGTTGGAAGTTCTACTTCA
GTGACACTGTCAACAGAGCCGCAACAATTTTAACTGAATTGTAATTCACG
AAGTGACATTAACGCTTCATGCGTGGCCATACATCACAATCACTATAAGA
ACGGCAATCGATCAGTTTTAGTGATGGCGCAGGGTAATTGGGAAGCTGAT
AAGATGCTTGATGTTTATATTCACGATTATTTTTTGAAAAGAAAATTGCA
TGCTTCTGCAAAAGCTTTTATGACTGAAGGGAAGGTTGCCACAGACCCAG
TAGCAATTGATGCACCTGGAGGATTTCTCTTTGAATGGTGGTCTGTCTTC
TGGGACATATTTATTTCAAGGACGAATGACAAACATTCCGAGAATGCAGC
GGCTTACATAGAGACGCAGCAGATTAAAACAAGGGAGCAACAACAGCTAC
AAATGCAGCAGCTGCAATTCATGCAACACCGTAATGCTCAACTGCAACGG
AGGGATCCTAATCATCCTTCTCTTGGTGGTTCTGTGAGTGCATTAAATTC
TGAAGGAATGATGGGGCAGCCATCAGCCAGCGTCTTGGCCATGAAAATGT
ATGAAGAACGTACAAAACACCCTCATTCCATGGATTTAGATACATCACCT
GCTCTAATGGATGCCAATAAGATGGCTCTTCTCAAAGCAACTACCAATCC
TCAGGGCCAGTTGGCACAAGGTAGTTCTGGGAACATTGCTGCAGCTATGC
AACGAATCCAAGGACGGACAACTTTAACCTCTGATATCAAA
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