CX043694

Overview
NameCX043694
Unique NameCX043694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIO1_DICDI (Serine/threonine-protein kinase rio1 OS=Dictyostelium discoideum GN=rio1 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.745e-63
Identity = 114/174 (65.52%), Postives = 135/174 (77.59%), Query Frame = 2
Query:   29 MSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKF 550
            + NSV  +I+E  +       +  +K DRAT EQ +DPRTR++LFKM+N+G F +INGCISTGKEANVYHA   + +E AVKVY TSILVFKDRDRYV G++RFR GY KHNPRKMVK WAEKE RNL RLK AGI CPTP +LR H+LVM FIGK G+AAPRLKDA +S +KF
Sbjct:  130 LPNSVQNSIKEIKKKDDKQGVRIVDKEDRATTEQVLDPRTRLMLFKMINKGAFSEINGCISTGKEANVYHAFTPNEEERAVKVYKTSILVFKDRDRYVTGEFRFRRGYSKHNPRKMVKVWAEKEFRNLTRLKNAGIPCPTPLILRNHILVMTFIGKDGYAAPRLKDATVSQEKF 303          

HSP 2 Score: 30.0314 bits (66), Expect = 2.745e-63
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  607 KLVHGDLSEYNILYFE 654
            +LVH DLSEYN+LY++
Sbjct:  322 RLVHADLSEYNMLYYK 337          

HSP 3 Score: 21.557 bits (44), Expect = 2.745e-63
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  561 YVEMIIAMRTLYQRCK 608
            Y++ I  MRTL+ +C+
Sbjct:  307 YLDCIKMMRTLFHKCR 322          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIOK1_HUMAN (Serine/threonine-protein kinase RIO1 OS=Homo sapiens GN=RIOK1 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.494e-61
Identity = 110/185 (59.46%), Postives = 138/185 (74.59%), Query Frame = 2
Query:    2 EWEGRMNV---GMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDK 547
            ++E ++N+    +++SV   + E  R       +  +KADRATVEQ +DPRTRM+LFKML RG+  +INGCISTGKEANVYHA+ ++G+  A+K+Y TSILVFKDRD+YV G++RFR+GYCK NPRKMVKTWAEKEMRNL+RL  A I CP P +LR HVLVM FIGK    AP LK+  LS  K
Sbjct:  115 KFENKINLDKLNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNVQLSESK 299          

HSP 2 Score: 30.0314 bits (66), Expect = 3.494e-61
Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1
Query:  577 LQCGHYIR----GAKLVHGDLSEYNILYFEG 657
            LQ   Y+R     A+LVH DLSE+N+LY  G
Sbjct:  305 LQVIQYMRRMYQDARLVHADLSEFNMLYHGG 335          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIO1_SCHPO (Serine/threonine-protein kinase rio1 OS=Schizosaccharomyces pombe GN=rio1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.888e-57
Identity = 98/148 (66.22%), Postives = 119/148 (80.41%), Query Frame = 2
Query:   86 KTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIG-KAGWAAPRLKD 526
            K+   +K+DRAT EQ +DPRTRM+L K++N G   +INGCISTGKEANVYHAT  DG+  A+K+Y TSILVFKDRDRYV G++RFR+GY K NPRKMV+ WAEKE+RNL R+ AAGI CP P LL+ HVL+M F+G K GWA P+LKD
Sbjct:  110 KSSIKDKSDRATSEQVLDPRTRMILLKLINNGTISEINGCISTGKEANVYHATNEDGKHFAIKIYKTSILVFKDRDRYVSGEFRFRHGYNKRNPRKMVRLWAEKEIRNLKRVAAAGIPCPEPILLKQHVLLMSFLGDKKGWAYPKLKD 257          

HSP 2 Score: 30.4166 bits (67), Expect = 2.888e-57
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  610 LVHGDLSEYNILYFEG 657
            LVH DLSEYN+LY +G
Sbjct:  285 LVHADLSEYNLLYHKG 300          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIOK1_MOUSE (Serine/threonine-protein kinase RIO1 OS=Mus musculus GN=Riok1 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.095e-56
Identity = 104/185 (56.22%), Postives = 132/185 (71.35%), Query Frame = 2
Query:    2 EWEGRMNVGMSN---SVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDK 547
            ++E ++N+   N   SVT  +   +R       +  +KADRATVEQ +DPRTRM+LFK+L++    +I+GCISTGKEANVY+A+   G+  A+K+Y TSIL+FKDRD+YV G++RFR GYCK NPRKMV+TWAEKEMRNL RLK A I CP P  LR HVL+M FIGK    AP LK+  LS  K
Sbjct:  114 KFENKINLNKLNVTDSVTNKVTVKLRQKEAESYRIKDKADRATVEQVLDPRTRMILFKLLHKDHISEIHGCISTGKEANVYYASTPSGESRAIKIYKTSILMFKDRDKYVTGEFRFRRGYCKGNPRKMVRTWAEKEMRNLCRLKTANIPCPEPIRLRSHVLLMGFIGKDDMPAPLLKNVQLSESK 298          

HSP 2 Score: 30.0314 bits (66), Expect = 4.095e-56
Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1
Query:  577 LQCGHYIR----GAKLVHGDLSEYNILYFEG 657
            LQ   Y+R     A+LVH DLSE+N+LY  G
Sbjct:  304 LQVIQYMRKMYQDARLVHADLSEFNMLYHGG 334          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIOK3_MOUSE (Serine/threonine-protein kinase RIO3 OS=Mus musculus GN=Riok3 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.291e-41
Identity = 81/185 (43.78%), Postives = 122/185 (65.95%), Query Frame = 2
Query:   17 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA-------TKSDGQ----ELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALS 538
            M++ +SN V  A+++          +  EK + +T E+A+DP+TR++++KM+N G+   I GCISTGKE+ V+HA        K DG+    E A+KV+ T++  FK+RD+Y++ D+RF+  + K NPRK+++ WAEKEM NL R++ AGI CPT  LL+ H+LVM FIG     AP+LK+  LS
Sbjct:  194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSLEDEKEDGKAIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQKAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLS 378          

HSP 2 Score: 27.335 bits (59), Expect = 1.291e-41
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  610 LVHGDLSEYNILYFEG 657
            LVH DLSEYN+L+  G
Sbjct:  402 LVHADLSEYNMLWHAG 417          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIOK3_BOVIN (Serine/threonine-protein kinase RIO3 OS=Bos taurus GN=RIOK3 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.857e-41
Identity = 80/188 (42.55%), Postives = 124/188 (65.96%), Query Frame = 2
Query:   17 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA---TKSDGQE--------LAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDK 547
            M++ +SN V  A+++          +  EK + +T E+A+DP+TR++++KM+N G+   I GCISTGKE+ V+HA   +  DG+E         A+KV+ T++  FK+RD+Y++ D+RF+  + K NPRK+++ WAEKEM NL R++ AGI CPT  LL+ H+LVM FIG     AP+LK+  LS ++
Sbjct:  194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDGKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLSSEE 381          

HSP 2 Score: 27.335 bits (59), Expect = 2.857e-41
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  610 LVHGDLSEYNILYFEG 657
            LVH DLSEYN+L+  G
Sbjct:  402 LVHADLSEYNMLWHAG 417          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIOK3_HUMAN (Serine/threonine-protein kinase RIO3 OS=Homo sapiens GN=RIOK3 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.073e-40
Identity = 79/188 (42.02%), Postives = 123/188 (65.43%), Query Frame = 2
Query:   17 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA-------TKSDGQ----ELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDK 547
            M++ +SN V  A+++          +  EK + +T E+A+DP+TR++++KM+N G+   I GCISTGKE+ V+HA        K D +    E A+KV+ T++  FK+RD+Y++ D+RF+  + K NPRK+++ WAEKEM NL R++ AGI CPT  LL+ H+LVM FIG     AP+LK+  L+ ++
Sbjct:  194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEE 381          

HSP 2 Score: 27.335 bits (59), Expect = 1.073e-40
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  610 LVHGDLSEYNILYFEG 657
            LVH DLSEYN+L+  G
Sbjct:  402 LVHADLSEYNMLWHAG 417          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIO1_YEAST (Serine/threonine-protein kinase RIO1 OS=Saccharomyces cerevisiae GN=RIO1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.823e-40
Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = 2
Query:   71 DMAIGKTKTS-EKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQ---------------------ELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAG-IRCPTPYLLRLHVLVMEFIGKA-GWAAPRLKD 526
            +++  + KTS +KA+RATVE  +DPRT   L  M+ RGV  D+NGC+STGKEANVYHA    G+                     E A+K+Y TSILVFKDR+RYV G++RFR    +HNPRKM+K WAEKE RNL R+  +G I  P P  ++ +VLVMEF+ +  G+A+P+LKD
Sbjct:   36 ELSFSRAKTSKDKANRATVENVLDPRTMRFLKSMVTRGVIADLNGCLSTGKEANVYHAFAGTGKAPVIDEETGQYEVLETDGSRAEYAIKIYKTSILVFKDRERYVDGEFRFRNSRSQHNPRKMIKIWAEKEFRNLKRIYQSGVIPAPKPIEVKNNVLVMEFLSRGNGFASPKLKD 211          

HSP 2 Score: 24.2534 bits (51), Expect = 1.823e-40
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  607 KLVHGDLSEYNIL 645
            +LVH DLSEYN +
Sbjct:  239 RLVHADLSEYNTI 251          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: RIO1_ENCCU (Probable serine/threonine-protein kinase RIO1 homolog OS=Encephalitozoon cuniculi GN=RIO1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.529e-32
Identity = 68/170 (40.00%), Postives = 103/170 (60.59%), Query Frame = 2
Query:   92 KTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVY-----------------HATKSDGQE-----LAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAAL 535
            +  +K+DRATV++ +D RT  VL ++  RG   ++ G + TGKE+NVY                   T+  G+E     + VK++ TSI+ F+DR+RY++ + RF+  +C  N RK++K WAEKE+RNL RL  AGI  P P  L+ ++LVM  IG+    APRL+DA++
Sbjct:   31 RKKDKSDRATVDKVLDKRTLKVLERLQARGKLVNLQGSLCTGKESNVYLGEASTSLCSKFIKNRYSVTEEPGREGQIVPVVVKIFKTSIMSFRDRERYIRSEKRFQR-FCTSNSRKLIKVWAEKEVRNLKRLNNAGIPSPEPIYLKNNILVMTQIGRCSEVAPRLRDASI 199          

HSP 2 Score: 34.6538 bits (78), Expect = 1.529e-32
Identity = 18/30 (60.00%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  580 QCGHYIRG----AKLVHGDLSEYNILYFEG 657
            QC   IR     A LVH DLSE+N+LYFEG
Sbjct:  208 QCVKIIRDMYKKAGLVHADLSEFNLLYFEG 237          
BLAST of CX043694 vs. ExPASy Swiss-Prot
Match: YOT3_CAEEL (Putative RIO-type serine/threonine-protein kinase 3 OS=Caenorhabditis elegans GN=riok-3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.586e-32
Identity = 67/157 (42.68%), Postives = 102/157 (64.97%), Query Frame = 2
Query:   74 MAIGKTKTS------EKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYFTSILVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKD 526
            MA GK+++       +K ++AT++ ++D  TR++L K +N+GVF  ++G I+TGKE+ V HA +      A+KVY T++  FK+R  YV+ D+RF+      NPR ++K WAE+E  NL R+   G+ CP P  +R +VLVM F+G  G AAPRLK+
Sbjct:  203 MAFGKSESKRQMRNKDKEEKATMDTSVDSDTRLLLLKWINQGVFDSVDGIIATGKESAVLHAAQDSATSYAIKVYKTTLSEFKNRSEYVKDDFRFK------NPRGVLKIWAEREFMNLSRMAKHGLPCPQPVKVRRNVLVMSFLGDQGLAAPRLKN 353          

HSP 2 Score: 23.8682 bits (50), Expect = 2.586e-32
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  610 LVHGDLSEYNIL 645
            LVH DLSE+N+L
Sbjct:  384 LVHADLSEFNLL 395          
The following BLAST results are available for this feature:
BLAST of CX043694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
RIO1_DICDI2.745e-6365.52Serine/threonine-protein kinase rio1 OS=Dictyostel... [more]
RIOK1_HUMAN3.494e-6159.46Serine/threonine-protein kinase RIO1 OS=Homo sapie... [more]
RIO1_SCHPO2.888e-5766.22Serine/threonine-protein kinase rio1 OS=Schizosacc... [more]
RIOK1_MOUSE4.095e-5656.22Serine/threonine-protein kinase RIO1 OS=Mus muscul... [more]
RIOK3_MOUSE1.291e-4143.78Serine/threonine-protein kinase RIO3 OS=Mus muscul... [more]
RIOK3_BOVIN2.857e-4142.55Serine/threonine-protein kinase RIO3 OS=Bos taurus... [more]
RIOK3_HUMAN1.073e-4042.02Serine/threonine-protein kinase RIO3 OS=Homo sapie... [more]
RIO1_YEAST1.823e-4049.43Serine/threonine-protein kinase RIO1 OS=Saccharomy... [more]
RIO1_ENCCU1.529e-3240.00Probable serine/threonine-protein kinase RIO1 homo... [more]
YOT3_CAEEL2.586e-3242.68Putative RIO-type serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_12H02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H02-O4-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043694 ID=CX043694; Name=CX043694; organism=Citrus sinensis; type=EST; length=658bp
GGAATGGGAGGGGAGGATGAATGTTGGCATGTCGAATTCTGTGACAACTG
CAATCCGTGAAAGTGTCCGAGACATGGCCATTGGTAAAACTAAAACCTCT
GAGAAAGCAGATCGTGCGACTGTTGAACAGGCTATTGACCCTAGGACTCG
TATGGTTTTATTCAAAATGCTGAATCGGGGTGTATTCCATGATATCAATG
GCTGCATTTCTACGGGAAAAGAAGCCAACGTTTATCATGCAACAAAATCT
GATGGTCAAGAACTAGCTGTCAAAGTGTACTTTACTTCCATTCTGGTTTT
TAAGGACCGAGATCGGTATGTCCAAGGTGACTATCGTTTCAGATATGGAT
ACTGCAAGCACAATCCAAGGAAAATGGTGAAAACTTGGGCTGAAAAAGAA
ATGAGGAATCTTATGAGACTGAAGGCAGCTGGAATTAGGTGCCCAACTCC
ATATCTTTTGAGACTTCATGTTCTGGTTATGGAATTTATAGGAAAGGCAG
GGTGGGCTGCTCCTCGTCTTAAGGATGCTGCTTTATCTTTGGACAAGTTT
ACGTGAAGGTTATGTTGAGATGATAATTGCAATGCGGACATTATATCAGA
GGTGCAAAACTTGTGCATGGAGACCTCAGTGAATATAACATACTTTATTT
TGAGGGTC
back to top