CX043691

Overview
NameCX043691
Unique NameCX043691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3424 contig Csv1_Contig3424:47..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_MALDO (Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 5.396e-91
Identity = 163/209 (77.99%), Postives = 184/209 (88.04%), Query Frame = -3
Query:  256 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFESM 879
            KFAQ QA+A RNS GSGLGLAICKRFVNLMEGHIWIESEGLGKGCTA FIVKLG PE SN+S L F PK+   H QTNFPGLKVLVMD+NGVSRSVTKGLL HLGCDV  VS ++E   V+S EH+VVFMDV +PGIDGYE+AV IH+KFT+RHERP++VALTGS D +TK+NCMRVG+DGVILKPVS++KMRSVLS+LLEHRVLFE+M
Sbjct:  533 KFAQTQALATRNSGGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTATFIVKLGFPERSNESKLPFAPKLQANHVQTNFPGLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVISQEHKVVFMDVSMPGIDGYELAVRIHEKFTKRHERPVLVALTGSIDKITKENCMRVGVDGVILKPVSVDKMRSVLSELLEHRVLFEAM 741          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_PRUPE (Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 2.506e-88
Identity = 160/209 (76.56%), Postives = 184/209 (88.04%), Query Frame = -3
Query:  256 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFESM 879
            KFAQ Q++A RNS GSGLGLAICKRFVNLMEGHIWIESEG GKGCTAIFIVKLG  E SN+S L F+ K+   H QTNFPGLKVLVMD+NG   SVTKGLL+HLGCDV TVSS++E   V+S EH+VVFMDVC+PGIDGYE+AV IH+KFT+RHERP++VALTG+ D +TK+NCMRVGMDGVILKPVS++KMRSVLS+LLEHRVLFE+M
Sbjct:  533 KFAQTQSLATRNSGGSGLGLAICKRFVNLMEGHIWIESEGPGKGCTAIFIVKLGFAERSNESKLPFLTKVQANHVQTNFPGLKVLVMDDNG---SVTKGLLVHLGCDVTTVSSIDEFLHVISQEHKVVFMDVCMPGIDGYELAVRIHEKFTKRHERPVLVALTGNIDKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLFEAM 738          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_PASED (Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.594e-85
Identity = 155/207 (74.88%), Postives = 178/207 (85.99%), Query Frame = -3
Query:  262 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFE 879
            KFAQ Q    RNSSGSGLGLAIC+RFVNLM+GHIW+ESEGLGKGCTAIFIVKLGIPE  N+S   F+ K+ V HGQT FPGLKVL+MD+NGVSR VTKGLLLHLGCDV TV S EEC +V S +H+VVFMDV +P  +G+E AV +H+KFT+RHERPL+VALT STD +TK+NCMRVGMDG ILKPVS++KMRSVLSDLLEH+VLFE
Sbjct:  533 KFAQTQTTGARNSSGSGLGLAICRRFVNLMDGHIWLESEGLGKGCTAIFIVKLGIPERLNESKPPFMSKVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIRVASQDHRVVFMDVGMP--EGFEAAVRLHEKFTKRHERPLVVALTASTDRMTKENCMRVGMDGAILKPVSVDKMRSVLSDLLEHKVLFE 737          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR2_PELHO (Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 7.546e-85
Identity = 149/209 (71.29%), Postives = 182/209 (87.08%), Query Frame = -3
Query:  256 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFESM 879
            KFAQ Q +A +NS GSGLGLAICKRFVNLMEGHIWI+SEG GKGCTA F+VKLGIPE S++  L  +PK+P  HGQTNF GLKVL++D+NGVSR+VT+GLL HLGCDV TVSS +E  +VVS +++VVFMDVC+P +DG+E+AV IH+KF  RHERPLIVALTG+ D +TKDNC RVGM+GV+LKPVS++KMR+VLS+LLEHRVLFE++
Sbjct:  533 KFAQTQPVATKNSGGSGLGLAICKRFVNLMEGHIWIDSEGPGKGCTATFVVKLGIPERSSEPKLLLMPKVPANHGQTNFSGLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSSDELLRVVSQDYKVVFMDVCMPEVDGFEIAVRIHEKFMTRHERPLIVALTGNIDQVTKDNCTRVGMEGVVLKPVSIDKMRNVLSNLLEHRVLFEAI 741          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_TOBAC (Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 5.408e-83
Identity = 151/208 (72.60%), Postives = 178/208 (85.58%), Query Frame = -3
Query:  259 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFES 879
            KFAQNQA+A ++S G+GLGLAI KRFVNLMEGHIWIESEGLGKG TAIFIVKLGIP  SN+  L F+P++P  H Q  F GLKVL+MD+NG SR VTKGLL+HLGCDV TVSS +EC +V++ EH+VVFMDV +PGID YEVAV IH+KF + H RPLIVALTG+TD +TK+NCMRVGMDGVILKPVS++KMRSVLS+LLEH V+ +S
Sbjct:  531 KFAQNQALATKSSGGTGLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIVKLGIPGRSNEPKLPFMPRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVLTQEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVILQS 738          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_SOLLC (Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.573e-82
Identity = 153/208 (73.56%), Postives = 176/208 (84.62%), Query Frame = -3
Query:  259 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFES 879
            KF Q+QA+A  NS G+GLGLAICKRFVNLMEGHIWIESEGLGKG TAIFI+KLGIP  +N+S L F+ K+P  H Q +F GLKVLVMDENGVSR VTKGLL HLGCDV TV S +EC +VV+HEH+VV MDV + GID YEVAV IH++F +RH RPLIVALTG+TD +TK+NCMRVGMDGVILKPVS+ KMRSVLS+LLEH V+ ES
Sbjct:  547 KFTQSQALATTNSGGTGLGLAICKRFVNLMEGHIWIESEGLGKGSTAIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGCDVTTVGSRDECLRVVTHEHKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVYKMRSVLSELLEHGVVLES 754          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_PELHO (Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.020e-81
Identity = 145/208 (69.71%), Postives = 179/208 (86.06%), Query Frame = -3
Query:  259 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFES 879
            KFAQ+Q +A +NS GSGLGLAI KRFVNLM+GHIWI+SEG  KGCT  F+VKLGIPE SN+  L  +PK+  +  QT+FPGLKVL+MDENG+SR VTKGLL+HLGCDV +VSS EEC ++VS +H+VVFMDV VPG+DG+E+AV IH+KF +RHERPLIVALT + D +TK+NC+RVGM+GVILKPVS++KMR+VLS LLEHR+LFE+
Sbjct:  533 KFAQSQPVATKNSGGSGLGLAISKRFVNLMDGHIWIDSEGPSKGCTVTFVVKLGIPEGSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVSQDHKVVFMDVRVPGLDGHELAVRIHEKFMKRHERPLIVALTSNADKVTKENCLRVGMEGVILKPVSVDKMRNVLSKLLEHRILFEA 740          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_BRAOL (Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 5.062e-81
Identity = 149/209 (71.29%), Postives = 178/209 (85.17%), Query Frame = -3
Query:  256 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQ-TNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFESM 879
            KFAQ Q++A R+S GSGLGLAI KRFVNLMEG+IWIESEG+GKGCTAIF VKL I   SN+S  S IPK+P + Q  NF GLKVLVMDENGVSR VTKGLL+HLGC+V TVSS EEC +VVSHEH+VVFMDVC PG++ Y++A+ IH+KFT+RH+RPL+VALTG+TD  TK+ CM  G+DGV+LKPVSL+ MR+VLSD LEHRVL+E+M
Sbjct:  530 KFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIESEGVGKGCTAIFDVKLAI---SNESKQSGIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHRVVFMDVCTPGVENYQIALRIHEKFTKRHQRPLLVALTGNTDKSTKEKCMSFGLDGVLLKPVSLDNMRNVLSDRLEHRVLYEAM 735          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_ARATH (Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.923e-80
Identity = 148/210 (70.48%), Postives = 179/210 (85.24%), Query Frame = -3
Query:  256 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMP-VHGQTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTR-RHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFESM 879
            KFAQ Q++A R+S GSGLGLAI KRFVNLMEG+IWIES+GLGKGCTAIF VKLGI E SN+S  S IPK+P +   +NF GLKVLVMDENGVSR VTKGLL+HLGC+V TVSS EEC +VVSHEH+VVFMDVC+PG++ Y++A+ IH+KFT+ RH+RPL+VAL+G+TD  TK+ CM  G+DGV+LKPVSL+ +R VLSDLLE RVL+E M
Sbjct:  529 KFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIESDGLGKGCTAIFDVKLGISERSNESKQSGIPKVPAIPRHSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLEPRVLYEGM 738          
BLAST of CX043691 vs. ExPASy Swiss-Prot
Match: ETR1_CUCSA (Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.628e-79
Identity = 143/208 (68.75%), Postives = 174/208 (83.65%), Query Frame = -3
Query:  259 KFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVLVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFQVVSHEHQVVFMDVCVPGIDGYEVAVHIHDKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLEKMRSVLSDLLEHRVLFES 879
            KFAQ   +  RNS GSGLGLAICKRFVNLMEGHIW+ESEGLGKGCTA FIVKLGI E SN+S L F  K+  +   T+FPGLKVLVMD+NGVSRSVTKGLL+HLGC+V T  S+EE  +VVS EH+VVFMD+C PG+DGYE+A+ I +KF + HERP +V LTG++D +TK++C+R GMDG+ILKPVS++KMRSVLS+L+E RVLFE+
Sbjct:  533 KFAQT-TVGPRNSCGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIAEQSNESKLPFTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLFET 739          
The following BLAST results are available for this feature:
BLAST of CX043691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ETR1_MALDO5.396e-9177.99Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 ... [more]
ETR1_PRUPE2.506e-8876.56Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 S... [more]
ETR1_PASED2.594e-8574.88Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=... [more]
ETR2_PELHO7.546e-8571.29Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_TOBAC5.408e-8372.60Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=... [more]
ETR1_SOLLC1.573e-8273.56Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR... [more]
ETR1_PELHO1.020e-8169.71Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_BRAOL5.062e-8171.29Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 P... [more]
ETR1_ARATH1.923e-8070.48Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR... [more]
ETR1_CUCSA3.628e-7968.75Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12H01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H01-O2-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043691 ID=CX043691; Name=CX043691; organism=Citrus sinensis; type=EST; length=881bp
TACCGCGGCCCCCCCTTTTTTTTCACAAATCTGTTAGTATTTCTTTGCCA
CTGCGTTCATAACAATTTGCAAAAAAATGCAAGTTTAATGAACAAACCTG
CCCTTTGTGTACATTTGTTATTTGGACCACTCTATTGAAAAGCTCCATCA
CAAAGTGGTATCTATCAAAAACCAAATGCTGTAGAGAAAGCTCTCACGTT
ACCTTAAATATTTTTTTCCCCCACTTAAAAGGTGTAGAAGCATTCTCCGT
TTTTACATGGACTCAAAGAGAACCCGGTGTTCCAAAAGATCTGACAAAAC
ACTCCTCATTTTTTCAAGTGAAACAGGTTTTAGGATAACTCCATCCATTC
CAACCCTCATGCAATTATCCTTGGTCAAATTGTCAGTACTTCCAGTAAGG
GCTACTATTAATGGCCTTTCATGACGCCTCGTAAATTTGTCATGTATATG
GACAGCGACTTCATAACCATCAATTCCAGGCACGCAAACGTCCATGAAGA
CCACCTGGTGTTCGTGAGAAACAACTTGGAAGCACTCCTCAACAGAGCTC
ACCGTCATTACATCACATCCCAGGTGCAACAGAAGTCCCTTAGTCACTGA
CCTGCTAACACCATTTTCATCCATGACAAGTACTTTAAGCCCTGGAAAAT
TGGTCTGTCCGTGTACCGGCATTTTTGGAATAAAGGAGAGGTTAGAATCA
TTTGAGTGCTCCGGAATCCCAAGTTTTACAATGAAGATGGCAGTACAACC
CTTTCCAAGACCTTCACTTTCAATCCAGATATGTCCCTCCATAAGATTCA
CAAACCTCTTACAAATTGCCAGGCCAAGTCCACTGCCACTAGAATTTCTT
AGTGCAATTGCTTGATTTTGTGCAAATTTTG
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