CX043677

Overview
NameCX043677
Unique NameCX043677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL42_ARATH (Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 108/155 (69.68%), Postives = 133/155 (85.81%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N++I+ LL+KGIQPYVTLYHWDLP HL E++GGW N++IV YF +YAD CFA+FGDRVK+WIT+NEPLQT+VNG+C GIFAPGR++    EPYLV+HHQ+LAHA A S+Y+ KYK+ QGG IGL VDCEWAE NS+K EDK AA RR+DFQ+GW+
Sbjct:  118 NDLINTLLEKGIQPYVTLYHWDLPSHLQEAIGGWTNRKIVDYFGLYADACFANFGDRVKHWITLNEPLQTSVNGHCIGIFAPGRNEKPLIEPYLVSHHQVLAHATAVSIYRSKYKESQGGQIGLSVDCEWAEPNSEKPEDKVAADRRIDFQLGWF 272          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL04_ORYSJ (Beta-glucosidase 4 OS=Oryza sativa subsp. japonica GN=BGLU4 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.123e-57
Identity = 100/155 (64.52%), Postives = 127/155 (81.94%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N++I+ +++KGI+PY TLYHWDLP +L +++GGWL+ +IV+YF +YA+ CFA+FGDRVK+WITINEPLQTAVNGY  G FAPG  +  +   YL AH+QILAHAAA  VY+RK+K  QGG +GLVVDCEWAE  S+K ED+ AA RRLDFQ+GWY
Sbjct:  112 NDLINFMIEKGIEPYATLYHWDLPHNLQQTVGGWLSDKIVEYFALYAEACFANFGDRVKHWITINEPLQTAVNGYGIGHFAPGGCEGETARCYLAAHYQILAHAAAVDVYRRKFKAVQGGEVGLVVDCEWAEPFSEKTEDQVAAERRLDFQLGWY 266          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL41_ARATH (Putative beta-glucosidase 41 OS=Arabidopsis thaliana GN=BGLU41 PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.227e-47
Identity = 91/165 (55.15%), Postives = 114/165 (69.09%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N++IDALL KGI+PYVTLYHWDLP  L +   GWL++E+V  FE YA TCF +FGDRVK WIT NEP   ++ GY TGI APGR             SS EPY+VAH+ +L+HAAA+  YQR +K+KQ G IG+ +D +W E  SD  EDK AA R +DF +GW+
Sbjct:  132 NSLIDALLAKGIKPYVTLYHWDLPQALEDRYEGWLSREVVDDFEHYAFTCFKAFGDRVKYWITFNEPHGVSIQGYDTGIQAPGRCSLLGHWFCKKGKSSVEPYIVAHNILLSHAAAYHTYQRNFKEKQRGQIGISLDAKWYEPMSDCDEDKDAARRAMDFGLGWF 296          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL25_ORYSJ (Beta-glucosidase 25 OS=Oryza sativa subsp. japonica GN=BGLU25 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.227e-47
Identity = 89/165 (53.94%), Postives = 115/165 (69.70%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG----------RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N++IDALL KGI+PYVTL+HWDLP  L +  GGWLN EI++ F  YA TCF  FGDRVK+WIT NEP   A++GY  GI APG          R   SSTEPY+VAH+ +LAHA AF  Y++ +K++QGG IG+ ++  W E  S+  ED  AAAR +DF++GW+
Sbjct:  121 NSLIDALLDKGIEPYVTLFHWDLPQALEDRYGGWLNSEIIEDFVQYAFTCFKEFGDRVKHWITFNEPYNFAIDGYDLGIQAPGRCSILSHVFCREGKSSTEPYIVAHNILLAHAGAFRAYEQHFKNEQGGLIGIALNSRWYEPFSNADEDTEAAARAMDFELGWF 285          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL40_ARATH (Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGLU40 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.388e-46
Identity = 87/165 (52.73%), Postives = 109/165 (66.06%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG----------RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N +I+ALL KGI+PYVTLYHWDLP  LH+   GWLN +I+  F  YA+ CF  FGDRVK+WIT NEP   A+ GY  G+ APG          R  +SSTEPY+V H+ IL HA    +Y++KYK KQGG++G+  D  W E  S+K ED  AA R  DFQ+GW+
Sbjct:  133 NKLINALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQIINDFAAYAEVCFQRFGDRVKHWITFNEPHTFAIQGYDVGLQAPGRCTILFKLTCREGNSSTEPYIVGHNVILTHATVSDIYRKKYKAKQGGSLGIAFDVMWFEPESNKTEDIEAAQRAQDFQLGWF 297          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL06_ORYSJ (Beta-glucosidase 6 OS=Oryza sativa subsp. japonica GN=BGLU6 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.287e-45
Identity = 89/165 (53.94%), Postives = 109/165 (66.06%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N +IDALL KGIQPYVTLYHWDLP  L +   GWL+++IV  F  YA+TCF  FGDRVK+WIT+NEP   A+ GY  G+ APGR            +S TEPY+VAHH ILAHAAA S+Y+ KYK  Q G +G+  D  W E  S+   D  AA R  +FQ+GW+
Sbjct:  146 NKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWF 310          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL34_ORYSJ (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.020e-42
Identity = 80/165 (48.48%), Postives = 108/165 (65.45%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N +I+ALL KGI+PYVTLYHWDLP  L +   GWL+++I+  + +YA+TCF +FGDRVK+WIT NEP   AV  Y +G+ APGR            +S TEPY+VAH+ IL+HA    +Y++KYK  Q G +G+  D  W E  S+   D  AA R  +FQ+GW+
Sbjct:  134 NKLINALLAKGIEPYVTLYHWDLPQALEDKYTGWLDRQIINDYAVYAETCFQAFGDRVKHWITFNEPHTVAVQAYDSGMHAPGRCSVLLHLYCKKGNSGTEPYIVAHNMILSHATVSDIYRKKYKASQNGELGISFDVIWYEPMSNSTADIEAAKRAQEFQLGWF 298          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41
Identity = 83/161 (51.55%), Postives = 105/161 (65.22%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            N +ID +++KGI+PY  LYH+DLPL LHE   GWL+  IV+ F  YAD CF +FGDRVK+W T NEP   A  GY  G  APGR        +S+TEPYL AHH IL+HAAA   Y+ KY+  Q G IG+++D  W E  SD   D++AA R  DF +GW+
Sbjct:  141 NRLIDYMVKKGIKPYANLYHYDLPLALHEQYLGWLSPNIVEAFADYADFCFQTFGDRVKDWFTFNEPRCVAALGYDNGFHAPGRCSGCDAGGNSTTEPYLAAHHLILSHAAAVKRYREKYQLYQKGRIGILLDFVWYEPFSDSNADRAAAQRARDFHLGWF 301          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL07_ORYSJ (Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 83/161 (51.55%), Postives = 108/161 (67.08%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            NN+I+ LLQKGI PYV LYH+DLPL L +  GGWLN ++   F  YAD CF +FG+RVK+W T NEP   A+ GY  G   P R        +S+TEPY+VAH+ +L+HAAA + Y+ KY+  Q G +G+V+D  W EA S+  ED++AA R  DF IGWY
Sbjct:  139 NNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWY 299          
BLAST of CX043677 vs. ExPASy Swiss-Prot
Match: BGL24_ORYSJ (Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.629e-40
Identity = 79/165 (47.88%), Postives = 100/165 (60.61%), Query Frame = 2
Query:    2 NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWY 466
            NN+ID L+ KG++P+VTL+HWD P  L +  GG+L+  IV+ F  YAD CF  FGDRVK WIT NEP   ++ GY  GI APGR             S  EPY+VAH+Q+LAHAA   +Y+ KY+  Q G IG+ +   W     D  EDK A  R LDF  GW+
Sbjct:  132 NNLIDELISKGVEPFVTLFHWDSPQALEQQYGGFLSNLIVEDFRDYADICFREFGDRVKYWITFNEPWSFSIGGYSNGILAPGRCSSQGKSGCSKGDSGREPYIVAHNQLLAHAAVVQIYREKYQGGQKGKIGIAIVSNWMIPYEDSKEDKHATKRALDFMYGWF 296          
The following BLAST results are available for this feature:
BLAST of CX043677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
BGL42_ARATH1.910e-6569.68Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGL... [more]
BGL04_ORYSJ1.123e-5764.52Beta-glucosidase 4 OS=Oryza sativa subsp. japonica... [more]
BGL41_ARATH5.227e-4755.15Putative beta-glucosidase 41 OS=Arabidopsis thalia... [more]
BGL25_ORYSJ5.227e-4753.94Beta-glucosidase 25 OS=Oryza sativa subsp. japonic... [more]
BGL40_ARATH3.388e-4652.73Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGL... [more]
BGL06_ORYSJ1.287e-4553.94Beta-glucosidase 6 OS=Oryza sativa subsp. japonica... [more]
BGL34_ORYSJ1.020e-4248.48Beta-glucosidase 34 OS=Oryza sativa subsp. japonic... [more]
BGL26_ORYSJ1.924e-4151.55Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL07_ORYSJ3.281e-4151.55Beta-glucosidase 7 OS=Oryza sativa subsp. japonica... [more]
BGL24_ORYSJ1.629e-4047.88Beta-glucosidase 24 OS=Oryza sativa subsp. japonic... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_12G03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G03-M6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043677 ID=CX043677; Name=CX043677; organism=Citrus sinensis; type=EST; length=677bp
CAACAATATCATTGATGCTCTTCTTCAAAAGGGTATTCAGCCTTATGTAA
CATTGTACCATTGGGATCTTCCTTTGCATCTTCATGAGTCAATGGGTGGG
TGGTTAAATAAGGAAATAGTAAAATATTTTGAAATTTATGCAGATACTTG
CTTTGCAAGTTTTGGCGATAGAGTAAAGAATTGGATTACAATAAATGAGC
CCCTACAAACTGCGGTTAATGGGTATTGTACTGGGATATTTGCTCCTGGA
AGACATCAGCATTCATCAACAGAGCCATATTTGGTTGCTCACCACCAGAT
CTTGGCCCATGCTGCAGCATTTTCAGTATACCAAAGAAAGTATAAGGATA
AGCAAGGGGGAAACATAGGGTTGGTGGTAGATTGTGAATGGGCTGAGGCT
AATTCAGATAAAATTGAAGATAAATCTGCAGCAGCGAGGCGCCTTGATTT
CCAGATTGGATGGTACTGCTTGAAATACTCAGTAAATGTTATTTCCTTGA
ATTAGTTAATTAATGGTGTTGTTTGGATAATTTGGTGCAAAAATAAAACT
TATAGTTCGCCAAGTCTGATTCTTTAAATTGCAAATCATTCCATCTCTTC
TTTTTTACAATGCAAATATTTATATTTGAGCTGGTGGCACATCTCCGTTT
TGTTTTCCTTTAAAAAAAAAAAAAAAA
back to top