CX043670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043670 vs. ExPASy Swiss-Prot
Match: CP74A_ARATH (Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43 Identity = 98/266 (36.84%), Postives = 153/266 (57.52%), Query Frame = 3 Query: 3 VLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHN-FVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKE--KCGTSALTFESVKSLELVQSVV 791 +LD KSF LFD++ VEKK++ G +MPS + TGG R+ +YLD SEPKH +LK LK S E ++ LFD++EKELS K + FNFL+++ G +P AD ++ + ++ KW+ + P +SI + + +EE +H+F+ P ALV DY +L+ F+E G+ +V+ D+ G+++EEA HNLLF FN +GG I P ++ I + +L E++ K LT +++ +EL +SVV Sbjct: 116 LLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNP-ADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVE--ADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVV 378
BLAST of CX043670 vs. ExPASy Swiss-Prot
Match: CP74_LINUS (Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.337e-42 Identity = 92/266 (34.59%), Postives = 149/266 (56.02%), Query Frame = 3 Query: 3 VLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK---EKCGTSALTFESVKSLELVQSVV 791 +LD KSF LFDM VEKK++ G +MPS + TGG R+ +YLD SEP H +LK + +K + E SS L + VE +L+ K ++ P ++ FNFLS++ G P D + ++ S++ KW+ + P +S+ + + +EE LHS P LV DY++L+ F V+ ++ G++++EA HN+LF + FN++GGF I P L+ I L KL E++ + G +T +++ + L++SVV Sbjct: 134 LLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSFTDLCEVVEYDLATKGKAAFNDPAEQAAFNFLSRAFFGVKP-IDTPLGKDAPSLISKWVLFNLAPILSVGLPKEVEEATLHSVRLPPLLVQNDYHRLYEFFTSAAGSVLDEA-EQSGISRDEACHNILFAVCFNSWGGFKILFPSLMKWIGRAGLELHTKLAQEIRSAIQSTGGGKVTMAAMEQMPLMKSVV 397
BLAST of CX043670 vs. ExPASy Swiss-Prot
Match: C74A2_PARAR (Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.634e-40 Identity = 87/266 (32.71%), Postives = 151/266 (56.77%), Query Frame = 3 Query: 3 VLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK---EKCGTSALTFESVKSLELVQSVV 791 +LD KSF LFD+ VEKK++ G +MPS K TGG RV +YLD SEP+HAQLK LK SS + + ++ LF+ +E EL++ ++ ++ F FL ++ ++P+ + ++ + +++ W+ + PT+ + + L+E LH+F P L+ YNKL+++ + V+++ ++ G+ K+EA+HN+LF + FN FGG I P + I L +L E++ + G +T E+++ + L +SVV Sbjct: 71 LLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYFNSNPE-ETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQA-EKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVV 334
BLAST of CX043670 vs. ExPASy Swiss-Prot
Match: C74A2_ORYSJ (Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38 Identity = 87/266 (32.71%), Postives = 140/266 (52.63%), Query Frame = 3 Query: 3 VLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCV-FNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGTSA--LTFESVKSLELVQSVV 791 +LD KSF LFD+ VEK+++ G FMPS TGG RV AYLD SEP HA++K + L +V S+ L DTVE +L+ S L F F+ ++ G P A + + G + WL Q+ P ++ + +E+ LH+ P L+S DY L+ + + + + GL++EEA HNLLF FN++GGF + +P++++ +A L +L +E++ + +T +++ +EL +SVV Sbjct: 71 LLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLSLLVSRKDAFVPVFRSNFGALLDTVESQLASGGGKSDFTALNDATSFEFIGEAYFGVRPSASSSLGTGGPTKAALWLLWQLAPLTTLGLPMIIEDPLLHTLPLPPFLISSDYKALYAYFAAAASQALDAAEG-LGLSREEACHNLLFATVFNSYGGFKLLLPQILSRVAQAGEKLHERLAAEIRSAVADAGGNVTLAALEKMELTRSVV 335
BLAST of CX043670 vs. ExPASy Swiss-Prot
Match: C74A1_ORYSJ (Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37 Identity = 89/265 (33.58%), Postives = 139/265 (52.45%), Query Frame = 3 Query: 3 VLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK--EKCGTSALTFESVKSLELVQSVV 791 +LD SF LFD +V+K ++ G FMPS TGG RV +YLD SEP HA LK L + + + LF +E +L+ + V F FL + ++G DP A + + +G ++ KW+ Q+ P +S+ + +E+ LHS P ALV DY++L +F K VV G + G+ +EEA+HN+LF L FN+FGG I P L+ + + +L +EV+ + +T +++ + LV+S V Sbjct: 110 LLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKADFGVHNDAAAFGFLCQGLLGRDP-AKSALGRDGPKLITKWVLFQLSPLLSLGLPTLVEDTLLHSLRLPPALVKKDYDRLADFFRDAAKAVVDEG-ERLGIAREEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRLATEVRGAVRDNGGEVTMKALAEMPLVKSAV 372
BLAST of CX043670 vs. ExPASy Swiss-Prot
Match: C74A4_ORYSJ (Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.196e-28 Identity = 81/268 (30.22%), Postives = 136/268 (50.75%), Query Frame = 3 Query: 3 VLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQ-PLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVVQRGQDEF-GLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK--EKCGTSALTFESV-KSLELVQSVV 791 +LD +SF L D +V+K + L G FMPS+ GG R A+LD ++P+HA++K M ++ +FD V+ L + + + + +F ++ G P + A + + + KWL Q+ P S + PLE++ LH+F P LV +Y ++ + ++ + G+ ++E +HNL+F+ FNA+GGF IF+P ++ +A L AKL SEV+ G +T +V K + LV+SVV Sbjct: 92 LLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDEVDAGLVAGGPVEFNKLNMRYMLDFTCAALFGGAPPSKA-MGDAAVTKAVKWLIFQLHPLASKVVKPWPLEDLLLHTFRLPPFLVRREYGEITAYFAAAAAAILDDAEKNHPGIPRDELLHNLVFVAVFNAYGGFKIFLPHIVKWLARAGPELHAKLASEVRAAAPAGGGEITISAVEKEMPLVKSVV 358
BLAST of CX043670 vs. ExPASy Swiss-Prot
Match: C74A3_ORYSJ (Allene oxide synthase 3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.028e-27 Identity = 81/268 (30.22%), Postives = 134/268 (50.00%), Query Frame = 3 Query: 3 VLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQ-PLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVVQRGQ-DEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGT---SALTFESVKSLELVQSVV 791 +LD +SF L D +V+K + L G +MPS GG R A+LD ++P+HA++K M ++ +FD VE L ++ + + + +F ++ G +P + + + + WLA Q+ P S + PLEE+ LH+F+ P LV Y L + V+ + G+ ++E + NL+F+ FNAFGGF IF+P ++ +A L AKL +EV+ T +T +V+ + LV+SVV Sbjct: 92 LLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDAVEAGLGA--AVEFNKLNMRYMLDFTCAALFGGEPPSKV-VGDGAVTKAMAWLAFQLHPIASKVVKPWPLEELLLHTFSLPPFLVRRGYADLKAYFADAAAAVLDDAEKSHTGIPRDELLDNLVFVAIFNAFGGFKIFLPHIVKWLARAGPELHAKLATEVRATVPTGEDDGITLAAVERMPLVKSVV 356 The following BLAST results are available for this feature:
BLAST of CX043670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043670 ID=CX043670; Name=CX043670; organism=Citrus sinensis; type=EST; length=792bpback to top |