DC900317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.457e-63 Identity = 121/157 (77.07%), Postives = 127/157 (80.89%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 472 LHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWK KERFAESKK +VPFL+LGNKIDIPYAASE+ELRYHLGLSNFTTGKGKVNL DSNVRPLEVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 37 LHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.104e-62 Identity = 120/157 (76.43%), Postives = 125/157 (79.62%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 472 LHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWK KERFAESKK VPFL+LGNKIDIPYAASE+ELRYHLGLSNFTTGKGKV+L SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK Sbjct: 37 LHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.968e-61 Identity = 117/156 (75.00%), Postives = 123/156 (78.85%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWK KERFAESK+ VPFL+LGNKIDIPYAASE+ELRYHLGL+NFTTGKGKV L DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 37 LHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.714e-59 Identity = 111/157 (70.70%), Postives = 122/157 (77.71%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 472 LHMLKDERLVQHQPTQYPTSEELSIG IKFKAFDLGGHQIARRVW+ +ERF E+KK NVPFL+LGNKIDIPYAASE+ELRYHLGL+ TTGKG +NLA +NVRP+EVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 37 LHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.081e-58 Identity = 116/158 (73.42%), Postives = 122/158 (77.22%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLA--DSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWK KERF+ESKK VPFL+LGNKID PYAASE+ELRYHLGL+NFTTGKGKV A DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 37 LHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.979e-44 Identity = 98/162 (60.49%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGN---KIDIPYAASEE-ELRYHLGLSNFT-TGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 472 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWK KERFAESKK FL L N +I+ P + RYH+G + + +GKVNLADSNVRP+EVFMCSIVR+MGYG+GF+W+SQYIK Sbjct: 37 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMGANGASPLARGKVNLADSNVRPVEVFMCSIVRQMGYGEGFRWMSQYIK 198
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.503e-39 Identity = 83/156 (53.21%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG++KF +DLGGHQ ARR+WK ERFAE++ +VPFL+LGNKID P A SEEELR +GL TTGKGKV L D +RP+E+FMCS+V + GYG+GF+W+SQYI Sbjct: 37 LHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQ-TTGKGKVPLKD--IRPIEIFMCSVVMRQGYGEGFRWISQYI 189
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.576e-39 Identity = 82/156 (52.56%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVWK ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFMCS++++ GYG+GF+W++QYI Sbjct: 42 LHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.576e-39 Identity = 82/156 (52.56%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVWK ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFMCS++++ GYG+GF+W++QYI Sbjct: 42 LHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.576e-39 Identity = 82/156 (52.56%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVWK ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFMCS++++ GYG+GF+W++QYI Sbjct: 42 LHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197 The following BLAST results are available for this feature:
BLAST of DC900317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900317 ID=DC900317; Name=DC900317; organism=Citrus sinensis; type=EST; length=817bpback to top |