DC900315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 286.574 bits (732), Expect = 5.905e-77 Identity = 140/177 (79.10%), Postives = 156/177 (88.14%), Query Frame = 2 Query: 26 KTSGHGTKVDEKQIAFVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 KTS K + + F +F+EKHR+LLN+FIRQNP LLEKS S+MLK PR +DFDNK+A+FRS+I+HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KAL Sbjct: 3243 KTSVDSQKKTDGSVTFSKFAEKHRRLLNSFIRQNPSLLEKSLSMMLKAPRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKAL 3419
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 2.931e-76 Identity = 139/177 (78.53%), Postives = 155/177 (87.57%), Query Frame = 2 Query: 26 KTSGHGTKVDEKQIAFVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 KT K + + F +F EKHR+LLN+F+RQNP LLEKSFS+MLK PR +DFDNK+A+FRS+I+HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KAL Sbjct: 3220 KTIVDSQKKIDGSVTFSKFVEKHRRLLNSFVRQNPSLLEKSFSMMLKAPRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKAL 3396
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 8.336e-39 Identity = 75/166 (45.18%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHD---HHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-STFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 F F+E+HR++LN +R NP L+ +FSL++K P+ ++FDNKR +F + ++ H PL++ VRR ++ DS+ L + +LK G+L + FQGEEG+DAGG+TREW+Q+LSR +FD +LF V ++ +TF PN S EHL +FKF+GR++GKAL Sbjct: 3606 FFTFTEEHRRILNELVRHNPKLMSGTFSLLVKNPKVLEFDNKRNYFNRSVHSKYQQTRHSFPPLQLQVRREHVFHDSFRSLYYKKADELKFGKLNIRFQGEEGVDAGGVTREWFQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKAL 3771
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.502e-37 Identity = 77/167 (46.11%), Postives = 112/167 (67.07%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-STFQPNPNSVYQTEHLSYFKFVGRVVGKALCAVC 565 F F++ H+KLLN IR NP L+ FSL++K P+ +DFDNKR +F ++++ H L ISVRR ++ DSY L +S +D+K +L + F+GE G+DAGG+TREWYQ+LSR +F+ LF V ++ +TF+PN S EHLS+FKF+G ++GKA+ C Sbjct: 2842 FFAFTDLHKKLLNEMIRSNPKLMSGPFSLLVKNPKILDFDNKRYYFTAQLR-AITHDRPKLSISVRREHVFLDSYRSLFFKSNEDIKISKLEISFKGEAGVDAGGITREWYQVLSRQMFNPDYALFIPVASDKTTFRPNRTSGINPEHLSFFKFIGMIIGKAISDQC 3007
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.591e-35 Identity = 70/164 (42.68%), Postives = 110/164 (67.07%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQ-HDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 F+ F+E+HRK++N + P L+ SFSL++K P+ ++F+NKR +F ++ + + PL I+VRR ++ DSY L + ++K +L +HF+ EEG+DAGG+TREW Q+L+R +F+ LF V G+ +TF PN +S +HLS+FKF GR++GKAL Sbjct: 2809 FISFTEEHRKIINMMVFTTPSLMSGSFSLLVKNPKVLEFENKRNYFNRQLHEEAAKEQYPPLNITVRRDHVFLDSYRALHFKDADEVKFSKLNIHFRDEEGVDAGGVTREWLQVLARQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKAL 2972
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.246e-34 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHSP-LRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALCAVC 565 F F++ H+KLLN IR NP L+ F+L++K P+ +DFDNKR F +K+K D+ P L I+VRR + DSY L ++ ++K +L + F+GE G+DAGG+TREWYQ+LSR +F+ LF V +++TF PN S EHLS+FKF+G ++GKA+ C Sbjct: 2852 FFPFTDAHKKLLNQMIRSNPKLMSGPFALLVKNPKVLDFDNKRYFFNAKLK--SDNQERPKLPITVRREQVFLDSYRALFFKTNDEIKNSKLEITFKGESGVDAGGVTREWYQVLSRQMFNPDYALFLPVPSDKTTFHPNRTSGINPEHLSFFKFIGMIIGKAIRDQC 3017
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4) HSP 1 Score: 134.42 bits (337), Expect = 3.750e-31 Identity = 70/164 (42.68%), Postives = 107/164 (65.24%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPG-LLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDH-HHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 F+RF+E HR +LN +RQ+ L + F++++ R +DFD KR +FR +++ + + + VRR ++ EDSY +L +S +++K RL + F+GEEG DAGGL REWY ++SR +F+ LF T+ G+ T+ NP+S HLSYFKFVGR+V KA+ Sbjct: 3958 FLRFAETHRTVLNQILRQSTTHLADGPFAVLVDYIRVLDFDVKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAV 4121
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 3.750e-31 Identity = 70/164 (42.68%), Postives = 107/164 (65.24%), Query Frame = 2 Query: 71 FVRFSEKHRKLLNAFIRQNPG-LLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDH-HHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 F+RF+E HR +LN +RQ+ L + F++++ R +DFD KR +FR +++ + + + VRR ++ EDSY +L +S +++K RL + F+GEEG DAGGL REWY ++SR +F+ LF T+ G+ T+ NP+S HLSYFKFVGR+V KA+ Sbjct: 3955 FLRFAETHRTVLNQILRQSTTHLADGPFAVLVDYIRVLDFDVKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAV 4118
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: PUB1_SCHPO (E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe GN=pub1 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.521e-19 Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 152 SLMLKVPRFV-DFDNKRAHFRSKIKHQHDHHHSP--LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF--TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKAL 553 SL VP++ DF K +F S Q H P I VRR +I EDSY ++ +S DLK RL + F GE+G+D GGL+RE++ LLS +F+ LF ++V N T Q NP+S EHL+YFKF+GRV+G A+ Sbjct: 381 SLDQNVPQYKRDFRRKLIYFLS----QPALHPLPGQCHIKVRRNHIFEDSYAEIMRQSATDLKKRLMIKFDGEDGLDYGGLSREYFFLLSHEMFNPFYCLFEYSSVDN-YTLQINPHSGINPEHLNYFKFIGRVIGLAI 514
BLAST of DC900315 vs. ExPASy Swiss-Prot
Match: NEDD4_HUMAN (E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 2.521e-19 Identity = 55/132 (41.67%), Postives = 81/132 (61.36%), Query Frame = 2 Query: 167 VPRFVDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLR-MRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNES-TFQPNPNS-VYQTEHLSYFKFVGRVVGKAL 553 VP D+ K FR K+K Q+D + + +RRA +LEDSY ++ ++ LK RL + F GE+G+D GG+ REW+ L+S+ +F+ LF ++ T Q NPNS + +HLSYFKF+GRV G A+ Sbjct: 935 VPYSRDYKRKYEFFRRKLKKQNDIPNK-FEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAV 1065 The following BLAST results are available for this feature:
BLAST of DC900315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900315 ID=DC900315; Name=DC900315; organism=Citrus sinensis; type=EST; length=569bpback to top |