CX043653

Overview
NameCX043653
Unique NameCX043653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3591 contig Csv1_Contig3591:1..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG3_HUMAN (5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens GN=PRKAG3 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 70/263 (26.62%), Postives = 121/263 (46.01%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFIL+L     + S L +  E+E H I  W+E   YL            +PLV   PND+L +    ++ N +  +P++   S +     +LHI +   +LK     F H   SL    LP  +    T +  +G    R LA++                   ++P+V++   ++ +Y R D+  LA  + Y H+   +M++ +AL+          L  +    C P ++L +V++R+A   V RLV+V+
Sbjct:  234 KQSFVGMLTITDFILVLHRY--YRSPLVQIYEIEQHKIETWRE--IYLQGCF--------KPLVSISPNDSLFEAVYTLIKNRIHRLPVLDPVSGN-----VLHILTHKRLLK-----FLHIFGSL----LPRPSFLYRT-IQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNECGQVVGLYSRFDVIHLAAQQTYNHL---DMSVGEALR-------QRTLCLEGVLSCQPHESLGEVIDRIAREQVHRLVLVD 459          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG2_MOUSE (5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus GN=Prkag2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 67/262 (25.57%), Postives = 116/262 (44.27%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIV 790
            K  FVG+L+ +DFI IL     + S + +  ELE H I  W+E   YL            +PLV   P+ +L D    ++ N++  +P+I   S +      L+I +   ILK + + F         +K  +  + +GT+           +A + P                 ++P+VD++  ++DIY + D+  LA +K Y   N  ++T+ QALQ     +       +    C   +TL  +++R+    V RLV+V
Sbjct:  308 KQSFVGMLTITDFINILHRY--YKSPMVQIYELEEHKIETWRE--LYLQETF--------KPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNA-----LYILTHKRILKFL-QLFMSDMPKPAFMKQNLDELGIGTY---------HNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTY---NNLDITVTQALQHRSQYF-------EGVVKCSKLETLETIVDRIVRAEVHRLVVV 532          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG1_RAT (5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus GN=Prkag1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 74/267 (27.72%), Postives = 118/267 (44.19%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR----RPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E  +      +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ  +  Y    L+      C   +TL  ++ RL    V RLV+V+
Sbjct:   78 KQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ-HRSHYFEGVLK------CYLHETLEAIINRLVEAEVHRLVVVD 303          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG1_PIG (5'-AMP-activated protein kinase subunit gamma-1 OS=Sus scrofa GN=PRKAG1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 74/267 (27.72%), Postives = 118/267 (44.19%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR----RPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E  +      +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ  +  Y    L+      C   +TL  ++ RL    V RLV+V+
Sbjct:   79 KQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ-HRSHYFEGVLK------CYLHETLETIINRLVEAEVHRLVVVD 304          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG1_HUMAN (5'-AMP-activated protein kinase subunit gamma-1 OS=Homo sapiens GN=PRKAG1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 74/267 (27.72%), Postives = 118/267 (44.19%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR----RPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E  +      +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ  +  Y    L+      C   +TL  ++ RL    V RLV+V+
Sbjct:   79 KQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ-HRSHYFEGVLK------CYLHETLETIINRLVEAEVHRLVVVD 304          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG1_BOVIN (5'-AMP-activated protein kinase subunit gamma-1 OS=Bos taurus GN=PRKAG1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 74/267 (27.72%), Postives = 118/267 (44.19%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR----RPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E  +      +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ  +  Y    L+      C   +TL  ++ RL    V RLV+V+
Sbjct:   79 KQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ-HRSHYFEGVLK------CYLHETLETIINRLVEAEVHRLVVVD 304          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG1_MOUSE (5'-AMP-activated protein kinase subunit gamma-1 OS=Mus musculus GN=Prkag1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12
Identity = 69/263 (26.24%), Postives = 117/263 (44.49%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK +  +          +   +  + +GT+           +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ  +  Y    L+      C   +TL  ++ RL    V RLV+V+
Sbjct:   78 KQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILKFLKLFITEFPKP-EFMSKSLQELQIGTYAN---------IAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ-HRSHYFEGVLK------CYLHETLETIINRLVEAEVHRLVVVD 303          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG3_PIG (5'-AMP-activated protein kinase subunit gamma-3 OS=Sus scrofa GN=PRKAG3 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12
Identity = 69/263 (26.24%), Postives = 118/263 (44.87%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFIL+L     + S L +  E+E H I  W+E   YL            +PLV   PND+L +    ++ N +  +P++   S       +LHI +   +LK     F H   +L    LP  +    T +  +G    R LA++                   ++P+V++   ++ +Y R D+  LA  + Y H+   +M + +AL+          L  +    C P +TL +V++R+    V RLV+V+
Sbjct:  259 KQSFVGMLTITDFILVLHRY--YRSPLVQIYEIEEHKIETWRE--IYLQGCF--------KPLVSISPNDSLFEAVYALIKNRIHRLPVLDPVSG-----AVLHILTHKRLLK-----FLHIFGTL----LPRPSFLYRT-IQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNETGQVVGLYSRFDVIHLAAQQTYNHL---DMNVGEALR-------QRTLCLEGVLSCQPHETLGEVIDRIVREQVHRLVLVD 484          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG3_BOVIN (5'-AMP-activated protein kinase subunit gamma-3 OS=Bos taurus GN=PRKAG3 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 66/263 (25.10%), Postives = 119/263 (45.25%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFIL+L     + S L +  E+E H I  W+E   YL            +PLV   P+D+L +    ++ N +  +P++   S       +LHI +   +LK +  + R        L   I  + +GT+         R LA++                   ++P++++   ++ +Y R D+  LA  + Y H+++S   + +AL+          L  +    C P +TL +V++R+A   V RLV+V+
Sbjct:  241 KQSFVGMLTITDFILVLHRY--YRSPLVQIYEIEEHKIETWRE--IYLQGCF--------KPLVSISPSDSLFEAVYTLIKNRIHRLPVLDPVSG-----AVLHILTHKRLLKFLHIFQRTLLPRPSFLYRTIQDLGIGTF---------RDLAVVLETAPILTALDIFVDRRVSALPVINEAGQVVGLYSRFDVIHLAAQQTYNHLDIS---VGEALR-------RRTLCLEGVLSCQPHETLGEVIDRIAREQVHRLVLVD 467          
BLAST of CX043653 vs. ExPASy Swiss-Prot
Match: AAKG3_MOUSE (5'-AMP-activated protein kinase subunit gamma-3 OS=Mus musculus GN=Prkag3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.194e-11
Identity = 66/263 (25.10%), Postives = 119/263 (45.25%), Query Frame = 2
Query:    8 KARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 793
            K  FVG+L+ +DFIL+L     + S L +  E+E H I  W+E   YL            +PLV   PND+L +    ++ N +  +P++   S       +L+I +   +LK     F H   +L      +C       +  +G    R LA++                   ++P+V+++  ++ +Y R D+  LA  + Y H+   +M++ +AL+          L  +    C P ++L +V++R+A   V RLV+V+
Sbjct:  234 KQSFVGMLTITDFILVLHRY--YRSPLVQIYEIEEHKIETWRE--IYLQGCF--------KPLVSISPNDSLFEAVYALIKNRIHRLPVLDPVSGT-----VLYILTHKRLLK-----FLHIFGALLPRPSFLCRT-----IQDLGIGTFRDLAVVLETAPVLTALDIFVDRRVSALPVVNESGQVVGLYSRFDVIHLAAQQTYNHL---DMSVGEALR-------QRTLCLEGVLSCQPHESLGEVIDRIAREQVHRLVLVD 459          
The following BLAST results are available for this feature:
BLAST of CX043653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
AAKG3_HUMAN3.385e-1226.625'-AMP-activated protein kinase subunit gamma-3 OS... [more]
AAKG2_MOUSE3.385e-1225.575'-AMP-activated protein kinase subunit gamma-2 OS... [more]
AAKG1_RAT3.385e-1227.725'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_PIG3.385e-1227.725'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_HUMAN3.385e-1227.725'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_BOVIN3.385e-1227.725'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_MOUSE4.421e-1226.245'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG3_PIG7.540e-1226.245'-AMP-activated protein kinase subunit gamma-3 OS... [more]
AAKG3_BOVIN1.286e-1125.105'-AMP-activated protein kinase subunit gamma-3 OS... [more]
AAKG3_MOUSE2.194e-1125.105'-AMP-activated protein kinase subunit gamma-3 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12E12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12E12-I24-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043653 ID=CX043653; Name=CX043653; organism=Citrus sinensis; type=EST; length=815bp
CTTCAGCAAGGCGCGGTTTGTTGGAGTTCTTAGTGCGTCAGATTTTATAT
TGATTTTAAGAGAGCTTGGAAATCATGGCTCAAATCTCACAGAGGAAGAG
CTTGAAACACACACCATATCTGCCTGGAAAGAGGGGAAAGCGTATTTGAA
CAGACAAATCGATAGTCATGGGAAAGCATTTCCAAGACCTCTTGTTTATG
CGGGGCCGAATGATAACTTGAAGGATGTAGCGCGAAAGATTTTGCATAAT
GAGGTGGCTACAGTTCCCATCATCCATTCATCTTCACAGGACGGTTCATT
TCCTCAGCTACTACATATTGCATCCCTTTCTGGAATTCTAAAATGTGTTT
GCAGGTATTTTAGGCATTGTTCTAGCTCGTTGCCCATTCTAAAGTTACCA
ATTTGTGCAATTCCTGTGGGTACTTGGGTTCCAAAGATTGGAGAGCCTAA
TCGACGACCATTGGCAATGTTGAGACCTAGTGCTTCTCTTAGTGCTGCAT
TAAATTTGTTAGTCCAAGCTCAAGTAAGTTCGATACCCATAGTTGATGAC
AACGACTCATTACTTGATATCTACTGTCGGAGTGATATTACGGCTTTGGC
AAAGGACAAAGCTTATGCGCACATTAATCTCAGTGAAATGACCATTCATC
AGGCATTGCAATTGGGACAAGATTCATATTCTCCTTATGAGTTGAGAAGT
CAAAGATGTCAGATGTGTTTGCCGTCAGATACATTGCATAAAGTGATGGA
GCGGTTGGCAAACCCAGGGGTTCGACGGCTTGTTATCGTGGAGGCTGGCA
GCAAGCGTGTAGAGG
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