DC900300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.465e-18 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y HLC ED+ W W++F SG A+Y +Y+I+Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 577 YFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.525e-18 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y HLC ED+ W W++F SG A+Y +Y+I+Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 578 YFHLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.525e-18 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y HLC ED+ W W++F SG A+Y +Y+++Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 578 YFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.525e-18 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y HLC ED+ W W++F SG A+Y +Y+++Y LQ ++G S +LY GY++IM + L TGTIGF F+FV ++S VK+D Sbjct: 578 YFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQ-ITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 558 YFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 557 YFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 558 YFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 557 YFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y LC ED+RWWW+ F SG A YV +Y+I Y V L + + +LLY GY+ +M ++ L TGTIGF ++ FV ++++VKID Sbjct: 557 YFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of DC900300 vs. ExPASy Swiss-Prot
Match: YON8_SCHPO (Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe GN=SPBC1105.08 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 35/87 (40.23%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 73 YMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLATGTIGFLTSFYFVHYLFSSVKID 333 Y LC E++ WWW++F G +YVF++S+ Y F + S S +A+LY GYSL+++V + G++GF +F FV+ +++S+KID Sbjct: 544 YFQLCSENYNWWWRSFITPGFCGIYVFIFSVFYWFFKISS-SSLATAVLYFGYSLLISVLVFFLCGSVGFFGAFLFVNKIYASIKID 629 The following BLAST results are available for this feature:
BLAST of DC900300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900300 ID=DC900300; Name=DC900300; organism=Citrus sinensis; type=EST; length=634bpback to top |