CX043563

Overview
NameCX043563
Unique NameCX043563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.027e-39
Identity = 88/224 (39.29%), Postives = 127/224 (56.70%), Query Frame = -2
Query:  118 EHTWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWT 789
            + TW GFS  +F  I    KL + SA M+CLE W  + LV ++GL+ N  ++   I++C+   +       GLSAA S RVSNELGAGNP  A  ++                 +       +  F++  E+I   + L PLLA+SI L+ +Q +LSGVA G GWQ +  + NL T+Y IG+PI  +LGFK SL V G+W G+I G+  Q  +L+++TL+  WT
Sbjct:  259 KETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWT 482          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.266e-32
Identity = 84/225 (37.33%), Postives = 114/225 (50.67%), Query Frame = -2
Query:  112 HTWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTKV 786
            HTW G++ E F    +  +LA+PS  MVC+E+W FEI  FLAGL+  +EL     A+     SVAYM+ +G   AAS RV N LGAGN DQA+ +                  L    ++ A  F+N  +II   + + P+ A     D++ G   GV RG G Q +    N   +Y  G PI   L F   L + GLW GLI  +  QA S L+  LR  W++V
Sbjct:  252 HTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQ--AVIYELASVAYMVPFGFGVAASVRVGNALGAGNADQARCSCTTVLLCAGVCALLVGILLAALKDVVAYIFTNDKDIISLVSQVMPIFAPFHLFDALAGTCGGVLRGTGKQKIGAVLNTIGYYGFGFPIGVSLMFAAKLGIIGLWAGLIVCVSFQAFSYLIYILRTNWSRV 474          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29
Identity = 72/220 (32.73%), Postives = 115/220 (52.27%), Query Frame = -2
Query:  121 WEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKW 780
            W GFS E+      + +LA+P   M+C EYWAFE++ F +G++  +EL +  +++   T +++Y + +G++AAA+TRV N +GAGN   AK A                  L    N W   F++  +++   A++ PL+AL    D+ Q V  G+ RG G Q +    N   +Y +G+P+A IL FKL   + GLWIG+   +   A      +L   W
Sbjct:  308 WGGFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVLGTTELAS--MSVLSTTSTLSYNLAFGVAAAAATRVGNLIGAGNTKLAKLATHVSINLGAAIGVIIAVILFLTRNTWTYIFTSDKDVVALVATIIPLVALINIADNTQCVAGGLLRGQGRQRIGGVVNFIAYYLLGLPVAIILCFKLDWGLYGLWIGIGAAILIIAGVETWCSLHVNW 525          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.801e-29
Identity = 71/223 (31.84%), Postives = 112/223 (50.22%), Query Frame = -2
Query:  115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783
            TW+G+S +        ++LALPS  M+C+E+W +EI  FLAGL+  +EL    +   + T  +AYM   G + AAS RV N LGAGN ++AK +                  +G   ++ A  F+   EI+   + +  +       D++ G+  G+ RG G Q L    N+  +YF+G P    L F LS+ + GLWIG    +F Q+   +++  +  W K
Sbjct:  262 TWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETELGAQSVVYELAT--IAYMFPLGFAVAASVRVGNALGAGNTERAKLSAKVALVCGVLVSCVVATLIGCTKDVIAYIFTTEEEIVSRVSQVMIMYGFFHLFDAIAGITGGIVRGAGKQLLGALCNIVGYYFVGFPTGVSLMFALSMGIIGLWIGFFGCVFLQSLFFIILIYKLDWKK 482          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.203e-28
Identity = 75/226 (33.19%), Postives = 110/226 (48.67%), Query Frame = -2
Query:  115 FEHTWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 792
            ++ TW G+S E      +  +LA+PS  M+C+E+WA+EI  FL+G++   EL    +        + YMI  GLS A + RV N LGAGN +QAK +                  L    ++    F++  +II   A +TP+ A+S   +S+ G   G+ RG G Q      N   +Y +G+PI   L F   L V GLW+G++     QA   L    R  WTK
Sbjct:  240 YQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVTY--ELAVIVYMIPMGLSVAVNVRVGNALGAGNIEQAKKSSAVALLVTELIAVVFCVMLLSCKDLVGYIFTSDRDIIALVAQVTPIYAVSHLFESLAGTSGGILRGSGNQKFGAIVNAIGYYVVGLPIGIALMFAAKLGVIGLWLGIVVCAVSQAVCFLGFIARLNWTK 463          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.352e-26
Identity = 75/221 (33.94%), Postives = 107/221 (48.42%), Query Frame = -2
Query:  121 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKW 783
            TW G+S+E      + L+LA+PS  M+C+E+WA+E+  FL+G++   EL    I        + YMI  G S AA+ RV N LGAGN DQAK +                  L    ++    F+   +I+   A + P+ A+S   +++     GV RG G Q +    N   +Y IG+PI   L F   L V GLW G+I    CQ S  L+   R  W
Sbjct:  243 TWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITY--ELAIIVYMIPAGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDWDIVALVAQVVPIYAVSHLFEALACTCGGVLRGTGNQKVGAIVNAIGYYVIGLPIGISLMFVAKLGVIGLWSGIIICSVCQTSCFLVFIARLNW 461          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.306e-26
Identity = 73/223 (32.74%), Postives = 106/223 (47.53%), Query Frame = -2
Query:  115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783
            TW G+S+E      + L+LA+PS  M+C+E+WA+E+  FL+G++   EL    I        + YMI  G S AA+ RV N LGAGN DQAK +                  L    ++    F+   +I+   A + P+ A+S   + +     G+ RG G Q +    N   +Y IG+PI   L F   L V GLW G+I    CQ +  L    R  W +
Sbjct:  244 TWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITY--ELAIIVYMIPSGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDRDIVALVAQVIPIYAVSHLFEGLACTCGGILRGTGNQKVGAIVNAIGYYVIGLPIGIALMFAAKLGVIGLWSGIIICTTCQTTCFLAFIARLNWKR 464          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.819e-24
Identity = 71/223 (31.84%), Postives = 106/223 (47.53%), Query Frame = -2
Query:  115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783
            TW G+S E      + L+LA+PS  M+C+E+WA+E+  FL+G++   EL    I        + YM+  G S AAS RV N LGAG+ +QA+ +                  L    +     F+   +II   A + P+ A+S   +++     GV RG G Q +    N   +Y +G+PI   L F  +L V GLW G+I     QA   L   ++  W K
Sbjct:  244 TWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVY--ELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKK 464          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23
Identity = 65/221 (29.41%), Postives = 104/221 (47.06%), Query Frame = -2
Query:  121 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKW 783
            TW G+S +          LA+PS  M+C+E+WA+EI  FL GL+   +L+   +   V T  V YMI  GLS     RV   LGA +  QAK +                  +    N     F+N  ++I   + + P+ ++    +++  V  GV RG G Q      N  T+Y IG+P+  +L F + + + GLW+G++  +F   ++ +  T R  W
Sbjct:  276 TWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVAT--VTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDW 494          
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23
Identity = 71/223 (31.84%), Postives = 104/223 (46.64%), Query Frame = -2
Query:  115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783
            TW G+S E      + L LA+PS  M+C+E+WA+E+  FL+G++   EL    I        + YM+  G S AAS RV N LGAG+ +QA+ +                  L    +     F+   +II   A + P+ A+S   +++     GV RG G Q +    N   +Y +G+PI   L F   L V GLW G+I     QA   L   ++  W K
Sbjct:  244 TWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVY--ELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATKLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKK 464          
The following BLAST results are available for this feature:
BLAST of CX043563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
TT12_ARATH9.027e-3939.29Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
S47A2_MOUSE6.266e-3237.33Multidrug and toxin extrusion protein 2 OS=Mus mus... [more]
YJ2D_SCHPO2.910e-2932.73Uncharacterized transporter C4B3.13 OS=Schizosacch... [more]
S47A1_DANRE3.801e-2931.84Multidrug and toxin extrusion protein 1 OS=Danio r... [more]
S47A1_RABIT4.203e-2833.19Multidrug and toxin extrusion protein 1 OS=Oryctol... [more]
S47A1_RAT1.352e-2633.94Multidrug and toxin extrusion protein 1 OS=Rattus ... [more]
S47A1_MOUSE2.306e-2632.74Multidrug and toxin extrusion protein 1 OS=Mus mus... [more]
S47A1_HUMAN2.819e-2431.84Multidrug and toxin extrusion protein 1 OS=Homo sa... [more]
S47A2_HUMAN1.071e-2329.41Multidrug and toxin extrusion protein 2 OS=Homo sa... [more]
S47A1_PONAB1.071e-2331.84Multidrug and toxin extrusion protein 1 OS=Pongo a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11H09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11H09-O17-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043563 ID=CX043563; Name=CX043563; organism=Citrus sinensis; type=EST; length=793bp
ATTAAGGTACATTTTGAAATTTTTTAAACATTTCTAATCACCATAATCCT
TTGTTATTGTATTTGGTTAAACTAAAAACAGGGGATTCATTTCCTCTGTT
CATGTCATGTCCACTTTAGTCCACTTACGGCGCAATGTAATCAACAAGAG
GGAGCTGGCTTGGCAGAAAAGGCCGCATATTAAGCCGATCCACAAACCCT
TAACATATAGACTCAACTTAAATCCAAGAATTGCTGCAATTGGCATGCCA
ATGAAATAGAATGTTGCCAAATTAGCCCACACAGCCAAGTGCTGCCAACC
ACATCCTCTTGCCACCCCTGATAAGACGCCTTGGACAGAATCAAGCGTTA
TTGAGAGAGCAAGAAGTGGTGTTAAAGAGGCAAACTCCTTTATGATTTCA
GGGCTGTTACTAAAGAAGCCAGCCCAGATGTTATGACCAAAACCTAGAGC
CAAAACAACCACGAGTGCAAGCAGTACAGAGAGCTTGACAGTCACAGCCA
TGGCATTCTTGGCTTGGTCGGGATTCCCTGCTCCCAATTCATTTGACACC
CTTGTGCTTGCAGCAGCACTAAGACCATAAGTAATCATGTAGGCAACAGA
TTCGGTATTTACACACATTGCGATCAATGAAGTAGTCAGTTCTGAGTTAG
GCATCAATCCTGCTAGGAACACTAGAATCTCAAAAGCCCAGTACTCGAGG
CATACCATTGCTGCAGAGGGCAGGGCTAGTTTTAAGATGGTGAGGATGAA
ACTGAATGATTCAAAAGAAAATCCTTCCCACGTATGCTCAAAC
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