CX043563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.027e-39 Identity = 88/224 (39.29%), Postives = 127/224 (56.70%), Query Frame = -2 Query: 118 EHTWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWT 789 + TW GFS +F I KL + SA M+CLE W + LV ++GL+ N ++ I++C+ + GLSAA S RVSNELGAGNP A ++ + + F++ E+I + L PLLA+SI L+ +Q +LSGVA G GWQ + + NL T+Y IG+PI +LGFK SL V G+W G+I G+ Q +L+++TL+ WT Sbjct: 259 KETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWT 482
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.266e-32 Identity = 84/225 (37.33%), Postives = 114/225 (50.67%), Query Frame = -2 Query: 112 HTWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTKV 786 HTW G++ E F + +LA+PS MVC+E+W FEI FLAGL+ +EL A+ SVAYM+ +G AAS RV N LGAGN DQA+ + L ++ A F+N +II + + P+ A D++ G GV RG G Q + N +Y G PI L F L + GLW GLI + QA S L+ LR W++V Sbjct: 252 HTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQ--AVIYELASVAYMVPFGFGVAASVRVGNALGAGNADQARCSCTTVLLCAGVCALLVGILLAALKDVVAYIFTNDKDIISLVSQVMPIFAPFHLFDALAGTCGGVLRGTGKQKIGAVLNTIGYYGFGFPIGVSLMFAAKLGIIGLWAGLIVCVSFQAFSYLIYILRTNWSRV 474
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29 Identity = 72/220 (32.73%), Postives = 115/220 (52.27%), Query Frame = -2 Query: 121 WEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKW 780 W GFS E+ + +LA+P M+C EYWAFE++ F +G++ +EL + +++ T +++Y + +G++AAA+TRV N +GAGN AK A L N W F++ +++ A++ PL+AL D+ Q V G+ RG G Q + N +Y +G+P+A IL FKL + GLWIG+ + A +L W Sbjct: 308 WGGFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVLGTTELAS--MSVLSTTSTLSYNLAFGVAAAAATRVGNLIGAGNTKLAKLATHVSINLGAAIGVIIAVILFLTRNTWTYIFTSDKDVVALVATIIPLVALINIADNTQCVAGGLLRGQGRQRIGGVVNFIAYYLLGLPVAIILCFKLDWGLYGLWIGIGAAILIIAGVETWCSLHVNW 525
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.801e-29 Identity = 71/223 (31.84%), Postives = 112/223 (50.22%), Query Frame = -2 Query: 115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783 TW+G+S + ++LALPS M+C+E+W +EI FLAGL+ +EL + + T +AYM G + AAS RV N LGAGN ++AK + +G ++ A F+ EI+ + + + D++ G+ G+ RG G Q L N+ +YF+G P L F LS+ + GLWIG +F Q+ +++ + W K Sbjct: 262 TWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETELGAQSVVYELAT--IAYMFPLGFAVAASVRVGNALGAGNTERAKLSAKVALVCGVLVSCVVATLIGCTKDVIAYIFTTEEEIVSRVSQVMIMYGFFHLFDAIAGITGGIVRGAGKQLLGALCNIVGYYFVGFPTGVSLMFALSMGIIGLWIGFFGCVFLQSLFFIILIYKLDWKK 482
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.203e-28 Identity = 75/226 (33.19%), Postives = 110/226 (48.67%), Query Frame = -2 Query: 115 FEHTWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 792 ++ TW G+S E + +LA+PS M+C+E+WA+EI FL+G++ EL + + YMI GLS A + RV N LGAGN +QAK + L ++ F++ +II A +TP+ A+S +S+ G G+ RG G Q N +Y +G+PI L F L V GLW+G++ QA L R WTK Sbjct: 240 YQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVTY--ELAVIVYMIPMGLSVAVNVRVGNALGAGNIEQAKKSSAVALLVTELIAVVFCVMLLSCKDLVGYIFTSDRDIIALVAQVTPIYAVSHLFESLAGTSGGILRGSGNQKFGAIVNAIGYYVVGLPIGIALMFAAKLGVIGLWLGIVVCAVSQAVCFLGFIARLNWTK 463
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.352e-26 Identity = 75/221 (33.94%), Postives = 107/221 (48.42%), Query Frame = -2 Query: 121 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKW 783 TW G+S+E + L+LA+PS M+C+E+WA+E+ FL+G++ EL I + YMI G S AA+ RV N LGAGN DQAK + L ++ F+ +I+ A + P+ A+S +++ GV RG G Q + N +Y IG+PI L F L V GLW G+I CQ S L+ R W Sbjct: 243 TWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITY--ELAIIVYMIPAGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDWDIVALVAQVVPIYAVSHLFEALACTCGGVLRGTGNQKVGAIVNAIGYYVIGLPIGISLMFVAKLGVIGLWSGIIICSVCQTSCFLVFIARLNW 461
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.306e-26 Identity = 73/223 (32.74%), Postives = 106/223 (47.53%), Query Frame = -2 Query: 115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783 TW G+S+E + L+LA+PS M+C+E+WA+E+ FL+G++ EL I + YMI G S AA+ RV N LGAGN DQAK + L ++ F+ +I+ A + P+ A+S + + G+ RG G Q + N +Y IG+PI L F L V GLW G+I CQ + L R W + Sbjct: 244 TWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITY--ELAIIVYMIPSGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDRDIVALVAQVIPIYAVSHLFEGLACTCGGILRGTGNQKVGAIVNAIGYYVIGLPIGIALMFAAKLGVIGLWSGIIICTTCQTTCFLAFIARLNWKR 464
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.819e-24 Identity = 71/223 (31.84%), Postives = 106/223 (47.53%), Query Frame = -2 Query: 115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783 TW G+S E + L+LA+PS M+C+E+WA+E+ FL+G++ EL I + YM+ G S AAS RV N LGAG+ +QA+ + L + F+ +II A + P+ A+S +++ GV RG G Q + N +Y +G+PI L F +L V GLW G+I QA L ++ W K Sbjct: 244 TWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVY--ELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKK 464
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 65/221 (29.41%), Postives = 104/221 (47.06%), Query Frame = -2 Query: 121 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKW 783 TW G+S + LA+PS M+C+E+WA+EI FL GL+ +L+ + V T V YMI GLS RV LGA + QAK + + N F+N ++I + + P+ ++ +++ V GV RG G Q N T+Y IG+P+ +L F + + + GLW+G++ +F ++ + T R W Sbjct: 276 TWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVAT--VTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDW 494
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 71/223 (31.84%), Postives = 104/223 (46.64%), Query Frame = -2 Query: 115 TWEGFSFESFSFILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRRKWTK 783 TW G+S E + L LA+PS M+C+E+WA+E+ FL+G++ EL I + YM+ G S AAS RV N LGAG+ +QA+ + L + F+ +II A + P+ A+S +++ GV RG G Q + N +Y +G+PI L F L V GLW G+I QA L ++ W K Sbjct: 244 TWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVY--ELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATKLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKK 464 The following BLAST results are available for this feature:
BLAST of CX043563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043563 ID=CX043563; Name=CX043563; organism=Citrus sinensis; type=EST; length=793bpback to top |