CX043559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 47/139 (33.81%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 427 P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV++E IA DGYSG+D+ N+C A+ N + ++ P M+DF+ A ++V SVS+ E +W E +G Sbjct: 363 PWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDAS----LMAMRRRIEGLTPEEIRNLSRDDMH-----MPTTMEDFEMALKKVSKSVSASDIEKYE--KWIEEFG 490
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 35/69 (50.72%), Postives = 52/69 (75.36%), Query Frame = 2 Query: 8 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 RP D+D A++RR+P V LP+A RE+I+R+IL+ E L++ ++L+ IA+ ++GYSGSDLK LC AA Sbjct: 242 RPQDVDAAILRRMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAA 310
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DVDL IA +GYSG+D+ N+C A+ Sbjct: 362 PWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDAS 429
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DVDL IA +GYSG+D+ N+C A+ Sbjct: 362 PWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDAS 429
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DVDL IA +GYSG+D+ N+C A+ Sbjct: 363 PWDIDEALRRRLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDAS 430
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV++E IA DGYSG+D+ N+C A+ Sbjct: 359 PWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDAS 426
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 31/68 (45.59%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 P+D+DEA+ RRL +R+ + LP+ RE+++R+ L + LA D+DL+ IA DGYSG+D+ N+C A+ Sbjct: 387 PWDIDEALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDAS 454
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 43/139 (30.94%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 427 P+D+DEA+ RRL +R+ + LP A R +++R+ L + ELA+DVD+ IA ++GYSG+D+ N+C A+ N + ++ P M+DF+ + ++V SVS ++++ + +W E +G Sbjct: 357 PWDIDEALRRRLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITNVCRDAS----LMAMRRRIEGLTPEEIRNISRAEMH-----MPTTMEDFESSLKKVSKSVS--ASDLEKYEKWIEEFG 484
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV+L IA +GYSG+D+ N+C A+ Sbjct: 362 PWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDAS 429
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_MOUSE (Katanin p60 ATPase-containing subunit A1 OS=Mus musculus GN=Katna1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV+L IA +GYSG+D+ N+C A+ Sbjct: 362 PWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDAS 429 The following BLAST results are available for this feature:
BLAST of CX043559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043559 ID=CX043559; Name=CX043559; organism=Citrus sinensis; type=EST; length=670bpback to top |