DC900267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYM_ARATH (Probable methionyl-tRNA synthetase OS=Arabidopsis thaliana GN=At4g13780 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.725e-36 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 3 Query: 6 IKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSIR 284 I S AMVL AS+SD +KVELVEPPK+A IGERV FPGFEGEPDDVLNPKKKVWET+ VDL+T LVACYKD+PFTTSAG+C VSSI +G+IR Sbjct: 705 IVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTKENLVACYKDVPFTTSAGVCKVSSISNGTIR 797
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYM_ORYSJ (Probable methionyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os06g0508700 PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.465e-32 Identity = 65/94 (69.15%), Postives = 74/94 (78.72%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSIR 284 GIKSHAMVL AS D+TKVELVEPP+SA +GERV F G+ GEP+ LN K K WE + DLH+N ELVACYKD+PFTTSAG+C V SI SG IR Sbjct: 708 GIKSHAMVLAASNEDHTKVELVEPPESAAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKSIASGEIR 801
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: AIMP1_HUMAN (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 OS=Homo sapiens GN=AIMP1 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 8.337e-20 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSA-GICTVSSIQSGSIR 284 G+ S AMV+CAS+ + K+E++ PP + G+R+ F F GEPD LNPKKK+WE +Q DLHTN E VA YK +PF G+C ++ + I+ Sbjct: 220 GVLSQAMVMCASSPE--KIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK 312
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: AIMP1_MOUSE (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 OS=Mus musculus GN=Aimp1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.857e-19 Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSA-GICTVSSIQSGSIR 284 G+ S AMV+CAS+ + KVE++ PP + G+R+ F F GEPD LNPKKK+WE +Q DLHTN E VA YK PF G+C ++ + I+ Sbjct: 218 GVLSQAMVMCASSPE--KVEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGAPFEVKGKGVCRAQTMANSGIK 310
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: AIMP1_CRIGR (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 OS=Cricetulus griseus GN=AIMP1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.857e-19 Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSA-GICTVSSIQSGSIR 284 GI S AMV+CAS+ + KVE++ PP + G+R+ F F GEPD LNPKKK+WE +Q DLHTN E VA YK PF G+C ++ + I+ Sbjct: 267 GILSQAMVMCASSPE--KVEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGSPFEVKGKGVCRAQTMANSGIK 359
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_DANRE (Tyrosyl-tRNA synthetase, cytoplasmic OS=Danio rerio GN=yars PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.350e-14 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 3 GIKSHAMVLCASTS-DNTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 GI+S AMVLCAS + KVE ++PP+ + G+RV G+E G+PDD L PKKKV+E +QVDL + E VA +K+ T G T +++ G+I Sbjct: 434 GIESQAMVLCASIEGEPRKVEPLDPPEGSAAGDRVYVEGYESGKPDDELKPKKKVFEKLQVDLKISGEFVAQWKEQNLMTKLGRITCKTLKGGNI 528
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: YLF4_SCHPO (Uncharacterized tRNA-binding protein C30C2.04 OS=Schizosaccharomyces pombe GN=SPAC30C2.04 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.234e-14 Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 3 Query: 6 IKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKD--------IPFTTSAGICTVSSIQSGSI 281 +KS AMV CAS+ D + VE V PP++A+IG+R+ F GF+ EP+ LNPK+K+WE +Q + +L+ YKD + G C ++ +G++ Sbjct: 349 VKSQAMVFCASSPDKSVVEFVLPPENAEIGDRLTFEGFDTEEPEAQLNPKRKIWEAIQPGFTSGEDLICGYKDESGLHRLFVKGKKDLGFCKAQTVVNGTL 449
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_BOVIN (Tyrosyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=YARS PE=2 SV=4) HSP 1 Score: 76.6406 bits (187), Expect = 8.928e-14 Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 G+KS M+LCAS N KVE ++PP + GERV G+E G+PD+ L PKKKV+E +Q D + E +A +K F T G + S++ G+I Sbjct: 433 GVKSQGMLLCASVEGVNRKVEPLDPPAGSAPGERVFVKGYEKGQPDEELKPKKKVFEKLQADFKISDEYIAQWKQTNFMTKMGSVSCKSLKGGNI 527
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_CHICK (Tyrosyl-tRNA synthetase, cytoplasmic OS=Gallus gallus GN=YARS PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 3 GIKSHAMVLCAST-SDNTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 G++S MVLCAS+ + +VE ++PP GERV G+E GEPDD L PKKKV+E +Q D + + +A +K+ F T G + S++ GSI Sbjct: 432 GVESQGMVLCASSVGEPRQVEPLDPPAECCAGERVYVEGYEDGEPDDELKPKKKVFEKLQADFRISEDCIAQWKERNFLTKLGSISCKSLKGGSI 526
BLAST of DC900267 vs. ExPASy Swiss-Prot
Match: SYYC_XENLA (Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus laevis GN=yars PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.989e-13 Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 3 GIKSHAMVLCASTSDNTK-VELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 281 GI+S M+LCAST K VE ++PP + GER+ G+E GEP+ L PKKKV+E +QVD + +L A +K F T G T +++ GSI Sbjct: 433 GIESQGMLLCASTEGEQKQVEPLDPPSGSAPGERIYIEGYENGEPEGELKPKKKVFEKLQVDFRISDDLCAQWKGKNFLTKLGSVTCKTLRGGSI 527 The following BLAST results are available for this feature:
BLAST of DC900267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900267 ID=DC900267; Name=DC900267; organism=Citrus sinensis; type=EST; length=562bpback to top |