CX043542

Overview
NameCX043542
Unique NameCX043542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3582 contig Csv1_Contig3582:1..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: U326_ARATH (UPF0326 protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.044e-52
Identity = 84/142 (59.15%), Postives = 113/142 (79.58%), Query Frame = 2
Query:   68 PVYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPGFTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLARLGFLCNCVLPAGLNETKV 493
            PVYLNVYDLTP+N Y YW G+GI+HSG++ H +EY +GAH++ T+G++EVEP+ CPGF FR+S+L+G T +   + R++MEKL+ +Y G+TYHLI KNCNHF  +VCL+LT KPIP W+NRLAR+G  CNC+LP  +  T V
Sbjct:   27 PVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGSFCNCLLPESIQLTAV 168          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_XENLA (PPPDE peptidase domain-containing protein 1 OS=Xenopus laevis GN=pppde1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.216e-28
Identity = 65/168 (38.69%), Postives = 99/168 (58.93%), Query Frame = 2
Query:   68 PVYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLARLG----FLCNC-----VLPAGLNETKVRQVRSDDRVTEGE 532
            P+ LNVYD+  +N Y   LG+G++HSG+QV+G E+ +G H +  +G+FE+ P         F F+++I +G TD    ++   +E+L +EY GN YHL+ KNCNHF + +   L  K IPRWVNRLA       FL +C     + PA L  +  ++++  D + E E
Sbjct:    5 PIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKEWLTPAALQSSISQELQ--DELEEAE 170          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_RAT (PPPDE peptidase domain-containing protein 1 OS=Rattus norvegicus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   71 VYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLAR----LGFLCNC-----VLPAGLNETKVRQVRSDDRVTEGE 532
            V LNVYD+  MN Y   +G+G++HSG++V+G E+ +G H +  +GIFE+ P         F F++++++G TD    ++   +E+L +EY GN YHL+ KNCNHF + +   L  K IPRW+NRLA     + FL +C     + PA L  +  ++++  D + E E
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ--DELEEAE 171          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_PONAB (PPPDE peptidase domain-containing protein 1 OS=Pongo abelii GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   71 VYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLAR----LGFLCNC-----VLPAGLNETKVRQVRSDDRVTEGE 532
            V LNVYD+  MN Y   +G+G++HSG++V+G E+ +G H +  +GIFE+ P         F F++++++G TD    ++   +E+L +EY GN YHL+ KNCNHF + +   L  K IPRW+NRLA     + FL +C     + PA L  +  ++++  D + E E
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ--DELEEAE 171          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_PIG (PPPDE peptidase domain-containing protein 1 OS=Sus scrofa GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   71 VYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLAR----LGFLCNC-----VLPAGLNETKVRQVRSDDRVTEGE 532
            V LNVYD+  MN Y   +G+G++HSG++V+G E+ +G H +  +GIFE+ P         F F++++++G TD    ++   +E+L +EY GN YHL+ KNCNHF + +   L  K IPRW+NRLA     + FL +C     + PA L  +  ++++  D + E E
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ--DELEEAE 171          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_MOUSE (PPPDE peptidase domain-containing protein 1 OS=Mus musculus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   71 VYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLAR----LGFLCNC-----VLPAGLNETKVRQVRSDDRVTEGE 532
            V LNVYD+  MN Y   +G+G++HSG++V+G E+ +G H +  +GIFE+ P         F F++++++G TD    ++   +E+L +EY GN YHL+ KNCNHF + +   L  K IPRW+NRLA     + FL +C     + PA L  +  ++++  D + E E
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ--DELEEAE 171          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_HUMAN (PPPDE peptidase domain-containing protein 1 OS=Homo sapiens GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   71 VYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLAR----LGFLCNC-----VLPAGLNETKVRQVRSDDRVTEGE 532
            V LNVYD+  MN Y   +G+G++HSG++V+G E+ +G H +  +GIFE+ P         F F++++++G TD    ++   +E+L +EY GN YHL+ KNCNHF + +   L  K IPRW+NRLA     + FL +C     + PA L  +  ++++  D + E E
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ--DELEEAE 171          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_DANRE (PPPDE peptidase domain-containing protein 1 OS=Danio rerio GN=pppde1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27
Identity = 60/161 (37.27%), Postives = 97/161 (60.25%), Query Frame = 2
Query:   68 PVYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLARLG----FLCNC-----VLPAGLNETKVRQVRSD 511
            PV LNVYD+  +N +   LG+G++HSG++++G E+ +G H +  +GIFE+ P         F F+++I++G TD    +V   +E++ +EY GN YHL+ KNCNHF + +   L  + IPRWVNRLA       FL +C     + PA L  +  ++++ +
Sbjct:    5 PVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGETFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVNRLAYFSSCVPFLQSCLPKEWLTPAALQSSVSQELQGE 165          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: PPDE1_CHICK (PPPDE peptidase domain-containing protein 1 OS=Gallus gallus GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27
Identity = 64/167 (38.32%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   71 VYLNVYDLTPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHDHSTTGIFEVEPKQCPG----FTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLAR----LGFLCNC-----VLPAGLNETKVRQVRSDDRVTEGE 532
            V LNVYD+  MN Y   LG+G++HSG++V+G E+ +G H +  +GIFE+ P         F F++++++G TD    ++   +E+L +E+ GN YHL+ KNCNHF + +   L  K IPRWVNRLA     + FL +C     + PA L  +  ++++  D + E E
Sbjct:    6 VILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ--DELEEAE 170          
BLAST of CX043542 vs. ExPASy Swiss-Prot
Match: HAG1_SCHPO (UPF0326 protein hag1 OS=Schizosaccharomyces pombe GN=hag1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23
Identity = 59/148 (39.86%), Postives = 91/148 (61.49%), Query Frame = 2
Query:   71 VYLNVYDL---TPMNGYAYWLGLGIYHSGVQVHGVEYGFGAHD-HSTTGIFEVEPKQ-CPGFTFRKSILIGRTDLGPREVRAFMEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLARLGF----LCNCVLPAGLNET 487
            VY+NVYDL   +P+N  A+ LGLGIYH+G+ + G EY FGAH+   +TG+F   P+    G  +R SI +    L   +V   + +L++E++G +Y L+ +NCNHF N   ++LT  PIP ++NR++R+G     + N +L  G   T
Sbjct:    3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPLEGCRWRCSIALPNCTLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIPSFLNRISRIGLAFPTITNALLQHGQKNT 150          
The following BLAST results are available for this feature:
BLAST of CX043542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
U326_ARATH1.044e-5259.15UPF0326 protein At4g17486 OS=Arabidopsis thaliana ... [more]
PPDE1_XENLA5.216e-2838.69PPPDE peptidase domain-containing protein 1 OS=Xen... [more]
PPDE1_RAT4.416e-2737.72PPPDE peptidase domain-containing protein 1 OS=Rat... [more]
PPDE1_PONAB4.416e-2737.72PPPDE peptidase domain-containing protein 1 OS=Pon... [more]
PPDE1_PIG4.416e-2737.72PPPDE peptidase domain-containing protein 1 OS=Sus... [more]
PPDE1_MOUSE4.416e-2737.72PPPDE peptidase domain-containing protein 1 OS=Mus... [more]
PPDE1_HUMAN4.416e-2737.72PPPDE peptidase domain-containing protein 1 OS=Hom... [more]
PPDE1_DANRE4.416e-2737.27PPPDE peptidase domain-containing protein 1 OS=Dan... [more]
PPDE1_CHICK4.416e-2738.32PPPDE peptidase domain-containing protein 1 OS=Gal... [more]
HAG1_SCHPO2.268e-2339.86UPF0326 protein hag1 OS=Schizosaccharomyces pombe ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11G07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11G07-M13-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043542 ID=CX043542; Name=CX043542; organism=Citrus sinensis; type=EST; length=766bp
AAAAGCAAAGCACAAAATGCTTTGCCGAATGGTTACGGTTCCGCGGAAGA
AAAAAACCGGTTCGGTTCCGGTTTATTTGAACGTCTACGATTTAACTCCG
ATGAATGGCTACGCTTATTGGCTCGGCCTCGGGATCTACCATTCTGGCGT
CCAAGTTCATGGCGTTGAGTACGGATTCGGAGCGCACGATCATTCGACGA
CGGGGATATTTGAAGTGGAGCCGAAGCAGTGTCCGGGATTCACGTTTAGG
AAGTCGATATTGATCGGGAGAACGGATCTCGGGCCGAGGGAAGTGCGCGC
GTTTATGGAAAAACTCGCCGAGGAGTATTCTGGCAATACGTATCATCTAA
TCACCAAGAACTGTAATCATTTCTGCAATGATGTGTGTCTTAAGCTCACT
AGGAAACCAATTCCTCGATGGGTTAATCGTCTCGCTCGCTTGGGTTTTCT
CTGCAACTGTGTTCTTCCAGCGGGTTTGAACGAAACAAAGGTTCGGCAAG
TTAGATCAGACGATAGAGTTACAGAGGGGGAAAAGAAGAAATTGAGAAGC
CATTCGAGTAGGTATTCGTCGTCATCTGATTCTGTACCTCGTCCACAATT
ATCATCTTGTCCAACTGCTTCTGCAATGAGAAGTAGTAGTAGACAAAGAC
GTTGTATTCCGACATCTTCGACTTTGGTGCATAGTTCATCCACTTCAAGC
TTGAGCTTGAAGCTTTAATTGCTTTTTGGGTTGCCACAGTTCTTAGAAAT
TTAGAATTTTTCACAT
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