CX043527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043527 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.263e-35 Identity = 103/252 (40.87%), Postives = 135/252 (53.57%), Query Frame = 3 Query: 102 EKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVAPRNWESMNLFPQQAGFA------PKNDTPNMIDSSLN-KPAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPVESTPPVSPGPPKILTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRP-CDLPIARRNSLHRFLEKRKDRIVARAPY 833 +K SFSQTCS LSQYLKE GSFGDLSLG++ + NG R+P TTM+LFP + S D V+++ + NLFP+Q F+ PK D M ++ + KP QTA +TIFY GQVI FNDF A+KA E++ LAS G++ NS A K T+ ++ +N +P+ E Q P +LPIARR SLHRFLEKRKDR+ ++APY Sbjct: 19 KKPSFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQP-TTTMSLFP-CEASNMDSMVQDV------KPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTA-----------------NSLA-------------------KNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTSKAPY 226
BLAST of CX043527 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.766e-33 Identity = 98/250 (39.20%), Postives = 130/250 (52.00%), Query Frame = 3 Query: 105 KSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVAPRNWESMNLFPQQAGFAPKNDTPNMIDSSLNK-------PAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPVESTPPVSPGPPKILTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRPCDLPIARRNSLHRFLEKRKDRIVARAPY 833 K SFSQTC+ LS+YLKE GSFGDLSLG++ + NG P T MNLFP + SG D S + + +FP+Q+ F+ + + D + K P Q+A +TIFYGG+V+ F+DF A+KA E++ LA+ GS+ S A+ N+ +A K S PV EP + P P S C+LPIARR SLHRFLEKRKDRI ++APY Sbjct: 15 KPSFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQP-----TMMNLFPC-EASGMDSSA----GQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTC------FTAEVNNNHSAYSQKEIASSPNPVCSPAKTAAQEP---IQPN-----------------PASLACELPIARRASLHRFLEKRKDRITSKAPY 228
BLAST of CX043527 vs. ExPASy Swiss-Prot
Match: TI11B_ARATH (Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.066e-21 Identity = 87/250 (34.80%), Postives = 120/250 (48.00%), Query Frame = 3 Query: 99 PEKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVA--PRNWESMNLFPQQAGFAPKNDTPNMID-SSLNKPAPQT--AQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPVESTPPVSPGPPKILTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRPCDLPIARRNSLHRFLEKRKDRIVARAPY 833 PEKS+FSQ CSLLS+YLKE GSFG++++G++ + + L D GQ ++ + R ++ + F D ID S K AP++ +Q+TIF+GG+V+ FN+FP DKA EIM++A + ++ + + +L KS V V P L EP+ S GNN E Q IARR SLHRF KRKDR VARAPY Sbjct: 7 PEKSNFSQRCSLLSRYLKEKGSFGNINMGLARK---------------SDLELAGKFDLKGQQNVIKKVETSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKEANHVAVDSKNSQSHM----------NLDKSNV-----VIPD----LNEPTSS-----------GNNEDQETGQ--QHQVVERIARRASLHRFFAKRKDRAVARAPY 209
BLAST of CX043527 vs. ExPASy Swiss-Prot
Match: TIF6B_ARATH (Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.076e-11 Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = 3 Query: 396 SLNKPAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKS--PVESTPPVSPGPPKI--------LTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRPCD-------LPIARRNSLHRFLEKRKDRIVARAPY 833 S +KP AQ+TIFY G V ++D +KA IM LA NGSS+ + P Q Q + AS+ S P P +S P+ T+ + + ++ G+N+ C P S + LP+AR+ SL RFLEKRK+R+ + +PY Sbjct: 168 SSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQ--VFSPPQTHQQVVHHTRASVDSSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNNQANGSNI--NCPVPVSCSTNVMAPTVALPLARKASLARFLEKRKERVTSVSPY 326 The following BLAST results are available for this feature:
BLAST of CX043527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043527 ID=CX043527; Name=CX043527; organism=Citrus sinensis; type=EST; length=835bpback to top |