DC900235

Overview
NameDC900235
Unique NameDC900235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900235 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.118e-31
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = 3
Query:   93 LKRNFTNCFFVILWMGTFIISSCEAYKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSGPYFFISGNADNCNKGQKLIVVVMAVR 482
            LK    + FF IL   + + +   A KFNVGG +G WV  P ENY  W+ + RF V+D+LYF Y KG+DSVL V K DY +CN K P++ + DG+S  S D  GP++FISGN DNC KGQKL VVV++ R
Sbjct:    4 LKMKSLSFFFTILLSLSTLFTISNARKFNVGG-SGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132          
BLAST of DC900235 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 3
Query:  144 FIISSCEAYKFNVGGKNGLWVVKPYENYN--HWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSGPYFFISGNADNCNKGQKLIVVVMAVRN 485
            F+ S   A +  VGGK+G W + P  +Y+   WA++ RF+V D + F+Y+ G DSVL VTK+ Y SCN   P+ + TDGE+    D SGP++FISG   +C KGQKL +VV++ R+
Sbjct:   21 FLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPRH 136          
BLAST of DC900235 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24
Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = 3
Query:   96 KRNFTNCFFVILWMGTFIISSCEAYKFNVGGKNGLWVV--KPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSGPYFFISGNADNCNKGQKLIVVVMAVR 482
            +R     FF+I ++ T ++ S E     VGGK   W +   P E+ N WAE +RF+V D+L +KY +  DSVL VTKD Y +CN   P  + ++G++    + SGPYFFISG+  NC +G+KL +VVM+ R
Sbjct:    3 QRTLVATFFLIFFLLTNLVCSKEII---VGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130          
BLAST of DC900235 vs. ExPASy Swiss-Prot
Match: NO552_SOYBN (Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  120 FVILWMGTFIISSCEAYKFNVGGKNGLW---VVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSL-TDGESVFSFDHSGPYFFISGNADNCNKGQKLIVVVMA 476
            F+++     +IS+ EA K+ VGG    W   + KP ++ +HWA   RF++ D+L FKY+K ++SV    + DY  CN       +   G +       G   FISGN  +C  G KL V+V++
Sbjct:   11 FLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKP-DSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVIS 132          
The following BLAST results are available for this feature:
BLAST of DC900235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ENL2_ARATH2.118e-3151.54Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
ENL1_ARATH3.275e-2445.69Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
ENL3_ARATH9.530e-2442.75Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
NO552_SOYBN1.864e-1134.15Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2... [more]
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Properties
Property NameValue
Genbank descriptionDC900235 VSS Citrus sinensis cDNA clone VS28275 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900235 ID=DC900235; Name=DC900235; organism=Citrus sinensis; type=EST; length=742bp
TATCATCACCTCCCTTTATAAATCCCTCACCACCACATCTCAATTCCCCT
TATCTTAATTTCCTAAAAGCAATTTGTGTTACAATAATGGAGTTGAAGAG
AAATTTCACTAATTGCTTCTTTGTGATTTTGTGGATGGGTACTTTTATTA
TTAGCTCGTGTGAGGCCTACAAGTTCAATGTTGGTGGTAAAAATGGATTA
TGGGTTGTGAAACCATATGAGAATTACAATCACTGGGCTGAGAGAATGCG
GTTTCAAGTTAACGATAGTCTTTATTTTAAGTACAAGAAAGGATCGGACT
CGGTGTTGGTGGTAACGAAGGACGATTATTTTTCATGCAACAACAAGAAA
CCGGTACAATCTTTAACTGACGGCGAGTCAGTTTTCAGTTTTGATCACTC
AGGTCCTTATTTTTTCATCAGCGGCAATGCTGATAACTGCAACAAAGGCC
AAAAGCTCATTGTTGTAGTTATGGCTGTGAGAAACAAATCCCAACACCAT
GAAGCTCCTCCGTCTCCTTGTCCGGTTTCTTGTACGCCGCCTGCTTCTTC
TCCACAGCCGTCTGCATCTTCTCCCCCGACATCACCTGCATCTCCTCGTT
CTTCGGTACCACCTCCAGTAGAGTCACCAAGTCCTATGCAGCCACCGGAG
CCTAGTGATATTCCATCAGATTTCGGTGCTNCAGCACCGGCTCTGACAGG
TTCGGTTCATCGGGTTGGGNTGTATAGGGGCTGGTTTTGGGG
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