DC900225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.123e-53 Identity = 96/115 (83.48%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 FA LYVFKWTSLLIPPTTVL++NLVG+VAG+S+AINSGYQSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S KA + GQCG+NC Sbjct: 962 FAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.123e-53 Identity = 96/115 (83.48%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 FA LYVFKWTSLLIPPTTVL++NLVG+VAG+S+AINSGYQSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S KA + GQCG+NC Sbjct: 962 FAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 2.475e-50 Identity = 94/115 (81.74%), Postives = 105/115 (91.30%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 FA LY+FKWT+LLIPPTT+LIVNLVG+VAGVS+AINSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VWS+LLASIFSLLWVR+DPFTS T + +CGINC Sbjct: 952 FAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDIL-ECGINC 1065
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.475e-50 Identity = 91/115 (79.13%), Postives = 106/115 (92.17%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 FA LY+FKWT+LLIPPTT+LI+NLVG+VAG+S+AINSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+ T ++ +CGINC Sbjct: 960 FAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-KCGINC 1073
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.475e-50 Identity = 91/115 (79.13%), Postives = 106/115 (92.17%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 FA LY+FKWT+LLIPPTT+LI+NLVG+VAG+S+AINSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+ T ++ +CGINC Sbjct: 960 FAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-KCGINC 1073
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.221e-50 Identity = 91/115 (79.13%), Postives = 105/115 (91.30%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 FA LY+FKWT+LLIPPTT+LI+NLVG+VAG+S+AINSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+ T ++ CGINC Sbjct: 968 FAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-TCGINC 1081
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.200e-50 Identity = 92/114 (80.70%), Postives = 106/114 (92.98%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANS-NGQCGI 485 FA LY+FKWT+LLIPPTTVL+VNL+GIVAGVS+A+NSGYQSWGPLFGKLFFA+WVIAHLYPFLKGLLGRQNRTPTIVIVWS+LLASIFSLLWVR++PF + AN+ NG+ G+ Sbjct: 967 FAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPFVDANPNANNFNGKGGV 1080
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.316e-48 Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 F LY FKWT+LLIPPTTVLI+N+VG+VAG+S AIN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPF TK +CGINC Sbjct: 913 FGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVL-KTKGPDTSKCGINC 1026
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.451e-47 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTS 446 FA LYVFKWTSLLIPPTT+L+VNLVGIVAGVS+AINSGYQSWGPL GKL FA WV+AHLYPFLKGLLGRQNRTPTIVIVWS LLASIFSLLWVR++PF S Sbjct: 954 FAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINPFVS 1053
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.168e-46 Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 FA LY FKWT+LLIPPTT+LI+N++G+VAGVS AIN+G ++WGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPFT + QCGINC Sbjct: 942 FAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTI-KARGPDVRQCGINC 1055 The following BLAST results are available for this feature:
BLAST of DC900225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900225 ID=DC900225; Name=DC900225; organism=Citrus sinensis; type=EST; length=830bpback to top |