DC900224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 2.900e-122 Identity = 206/224 (91.96%), Postives = 217/224 (96.88%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 PIFNMEDIEEG+EGY+DERS+LMSQK LEKRFGQSP+FIA+TFM QGGIPP+TNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP FKGSAPINLSDRLNQVLRWALGS+EILLSRHCPIWYGYNGRLKLLERLAYINTIVYP+TSIPLIAYC LPA CLLTNKFIIPEISN+A M+FILLF SIFATGILE+RWSG Sbjct: 686 PIFNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSG 909
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 2.900e-122 Identity = 206/224 (91.96%), Postives = 217/224 (96.88%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 PIFNMEDIEEG+EGY+DERS+LMSQK LEKRFGQSP+FIA+TFM QGGIPP+TNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP FKGSAPINLSDRLNQVLRWALGS+EILLSRHCPIWYGYNGRLKLLERLAYINTIVYP+TSIPLIAYC LPA CLLTNKFIIPEISN+A M+FILLF SIFATGILE+RWSG Sbjct: 686 PIFNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSG 909
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 434.491 bits (1116), Expect = 2.455e-121 Identity = 203/224 (90.62%), Postives = 219/224 (97.77%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 P+FNMEDI+EG EGYDDERS+LMSQ+S+EKRFGQSPVFIAATFMEQGGIPPTTNPA+LLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYC PPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGY+GRL+LLER+AYINTIVYP+TSIPLIAYC LPAFCL+T++FIIPEISN+AS+WFILLFISI TGILE+RWSG Sbjct: 691 PLFNMEDIDEGFEGYDDERSILMSQRSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSG 914
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 2.461e-113 Identity = 192/223 (86.10%), Postives = 210/223 (94.17%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWS 669 P+FNMEDI+E VEGY+DE SLL+SQK LEKRFGQSPVFIAATFMEQGG+P TTNP +LLKEAIHVISCGYE KT+WGKEIGWIYGSVTEDILTGFKMHARGWISIYC+P RPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLER+AYINTIVYP+TSIPL+AYC LPAFCL+TN FIIPEISN AS+ F+LLF SI+A+ ILE++WS Sbjct: 678 PLFNMEDIDEDVEGYEDEMSLLVSQKRLEKRFGQSPVFIAATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWS 900
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 1.493e-110 Identity = 189/226 (83.63%), Postives = 202/226 (89.38%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEG--YDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 P+FN+EDIEEGVEG +DDE+SLLMSQ SLEKRFGQS F+A+T ME GG+P + P SLLKEAIHVISCGYEDKTEWG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALGS+EIL SRHCPIWYGY GRLK LER AYINT +YPLTSIPL+ YC LPA CLLT KFIIPEISNFAS+WFI LFISIFATGILE+RWSG Sbjct: 690 PVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAAFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSG 915
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 9.676e-110 Identity = 186/226 (82.30%), Postives = 203/226 (89.82%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEG--YDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 P+FN+EDIEEG+EG +DDE+SLLMSQ SLEKRFGQS VF+A+T ME GG+P + P SLLKEAIHVISCGYEDK++WG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALGS+EIL SRHCPIWYGY GRLK LER AYINT +YPLTSIPL+ YC LPA CLLT KFIIPEISNFAS+WFI LF+SIFATGILE+RWSG Sbjct: 682 PVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSG 907
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 9.676e-110 Identity = 186/226 (82.30%), Postives = 203/226 (89.82%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEG--YDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 P+FN+EDIEEG+EG +DDE+SLLMSQ SLEKRFGQS VF+A+T ME GG+P + P SLLKEAIHVISCGYEDK++WG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALGS+EIL SRHCPIWYGY GRLK LER AYINT +YPLTSIPL+ YC LPA CLLT KFIIPEISNFAS+WFI LF+SIFATGILE+RWSG Sbjct: 682 PVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSG 907
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 391.734 bits (1005), Expect = 1.825e-108 Identity = 180/226 (79.65%), Postives = 204/226 (90.27%), Query Frame = 1 Query: 1 PIFNMEDIEEGVEG--YDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 P+FN++DIEEGVEG +DDE++LLMSQ SLEKRFGQS VF+A+T ME GG+PP+ P +LLKEAIHVISCGYEDK++WG EIGWIYGSVTEDILTGFKMHARGW SIYCMP PAFKGSAPINLSDRLNQVLRWALGS+EIL SRHCPIWYGYNGRLK LER AY+NT +YP+TSIPL+ YCTLPA CL TN+FIIP+ISN AS+WF+ LF+SIFATGILE+RWSG Sbjct: 674 PVFNLDDIEEGVEGAGFDDEKALLMSQMSLEKRFGQSAVFVASTLMENGGVPPSATPENLLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSG 899
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 7.176e-105 Identity = 175/224 (78.12%), Postives = 201/224 (89.73%), Query Frame = 1 Query: 4 IFNMEDIEEGVEGYDD-ERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 IF++EDIEEG+EGYD+ E+S LMSQK+ EKRFG SPVFIA+T ME GG+P TN +SL+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGF+MH RGW S+YCMP RPAFKGSAPINLSDRL+QVLRWALGS+EI SRHCP+WY + G+LK+LERLAYINTIVYP TSIPL+AYCT+PA CLLT KFIIP I+NFAS+WF+ LF+SI AT ILE+RWSG Sbjct: 659 IFDLEDIEEGLEGYDELEKSSLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSG 882
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 3.685e-101 Identity = 172/225 (76.44%), Postives = 196/225 (87.11%), Query Frame = 1 Query: 7 FNMEDIEEGVEGYDD-ERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPP--TTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 F +E+IEEG+EGYD+ ERS LMSQKS EKRFGQSPVFIA+T +E GG+P +PA+L+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGFKMH RGW S+YC P R AFKGSAPINLSDRL+QVLRWALGS+EI +SRHCP+WY Y GRLK LER AY NTIVYP TSIPL+AYCT+PA CLLT KFIIP ++N AS+WFI LF+SI ATG+LE+RWSG Sbjct: 672 FELEEIEEGLEGYDELERSSLMSQKSFEKRFGQSPVFIASTLVEDGGLPQGAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSG 896 The following BLAST results are available for this feature:
BLAST of DC900224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900224 ID=DC900224; Name=DC900224; organism=Citrus sinensis; type=EST; length=676bpback to top |