DC900219

Overview
NameDC900219
Unique NameDC900219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:356..1258. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 402.134 bits (1032), Expect = 2.190e-111
Identity = 190/228 (83.33%), Postives = 209/228 (91.67%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLANK 686
            G+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLV RLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA D RTRP VKKMA  Q YFFKEF+ AI +LSENNPL G+KGEIRK CNLANK
Sbjct:  101 GLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANK 328          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.447e-71
Identity = 128/228 (56.14%), Postives = 164/228 (71.93%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPL-KTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            GMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I + KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LV RLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LA D RT P+V KMA   +YF ++FS  + LLSE NPL G +GEIRK C   N
Sbjct:  100 GMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.734e-36
Identity = 87/230 (37.83%), Postives = 129/230 (56.09%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXR--LYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  IE++K  +E  CPG VSCADILVL+ RD V ALGGP +P+ TGRRDGR S A  +   + D + ++  ++  F++ G+    LV L G+H++G  HC     R  L P+     +D +L+  +   +++KC  ++ DP     V ND  T    DN YY+N+L +KGL   D  L  D RTR  V+ +A  Q+ FF  ++ +   +S      G +GEIR+ C+  N
Sbjct:  102 FAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSL-DP-TTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.795e-36
Identity = 81/223 (36.32%), Postives = 124/223 (55.61%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +   R+ P      NP     +   C ++  DP     V ND  TP   DN Y++NI    GL+  DH L  D RTRP+V+  A  Q  FF +F+ A+  LS +  L G +GEIR+ C+  N
Sbjct:  108 FDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTI--SVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.559e-35
Identity = 82/225 (36.44%), Postives = 120/225 (53.33%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H++G++ C     R+Y E +  +N          CP A            D  T    DNNY++N++  +GL+  D  L     T   V+  + +   F  +F+ A+  + + +PL G+ GEIRKVC   N
Sbjct:  103 RGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRASGSGDG-NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.270e-34
Identity = 84/225 (37.33%), Postives = 123/225 (54.67%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLANKL 689
            F  +  IK A+E  CPGVVSCADIL  + RD V  +GGP+  +K GR+DG +S+A  ++  LP  N S+  +L  F   G     LVAL G H++G +HC +   R++P+VDP LN      +   C +   +     ++  D  TP   DN Y++N+    GL+  DH L  D  TRP+V+  A +Q  FF++F+ A+  L          GE+R+ C+  NKL
Sbjct:  102 FDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFL--DPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFNKL 324          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.826e-34
Identity = 79/230 (34.35%), Postives = 124/230 (53.91%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRL-------YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G +HC     R        +  +D +L+  +   +++KC  +     +   V ND  T  V DN YYRN+  +KGL   D  L  D RTR  V+++A  ++ FF+ +S +   LS      G  GEIR+ C+  N
Sbjct:  100 FSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSS---ESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.404e-33
Identity = 80/225 (35.56%), Postives = 121/225 (53.78%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +  +N          CP A     A      D  +    DN+Y++N++  +GL+  D  L     T   V+  + S   F  +F+ A+  + + +PL G+ GEIRKVC   N
Sbjct:   75 RGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRAAGSGDA-NLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 143.28 bits (360), Expect = 1.834e-33
Identity = 85/262 (32.44%), Postives = 129/262 (49.24%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYP-----EVDPALNPDHVPHMLHKCPDAI--------PD------------------------PKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLA 680
            ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+HS+G THC     RLY      + DP LNP  +  +  KCP ++        PD                         + +    N+ G        Y+R ++ NKGLM  D QL     T  +V+  A     F +EF+ ++  LS  N L G  G++R  C+ A
Sbjct:  139 LKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSKA 400          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.834e-33
Identity = 82/231 (35.50%), Postives = 120/231 (51.95%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-AXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD R++      + +P    ++  +L  F   G+D   LVALLGSH++G + C+    RLY      + D  LN D+   +   CP +  D         D  TP   DN YY+N+++ +GL+  D  L      T   VK  A ++  FF++F+ ++  +   +PL GT GEIR++C   N
Sbjct:  114 RGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNL---DYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN 341          
The following BLAST results are available for this feature:
BLAST of DC900219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER42_ARATH2.190e-11183.33Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH6.447e-7156.14Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER18_ARATH6.734e-3637.83Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER63_ARATH8.795e-3636.32Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER52_ARATH2.559e-3536.44Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER41_ARATH1.270e-3437.33Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER46_ARATH4.826e-3434.35Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PERP7_BRARA1.404e-3335.56Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER48_ARATH1.834e-3332.44Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER36_ARATH1.834e-3335.50Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]

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Properties
Property NameValue
Genbank descriptionDC900219 VSS Citrus sinensis cDNA clone VS28258 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900219 ID=DC900219; Name=DC900219; organism=Citrus sinensis; type=EST; length=903bp
TTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAA
AGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGG
TAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAG
GAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTC
CCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCAT
TGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCNCCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCNCCGACAANAGGACAAGACC
TTATGTTAAGAAGATGGCCAANAGTCAAGACTACTTCTTCAAGGAATTTT
CAANAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCNCAGGNACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCNCGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCNTGTTTCTTCTATGAGGAANAAAANAGTGTNAGATGAGCTCC
CAATAANATGGTTTTTCTAGATCGGTTTGTTTCCTGTNANATGTTCGTAT
TACTGCTATTATGNTCCTTANATGGACCGTCCAATGTTTAAGCCTAGGCT
TTC
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