DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_TOBAC (Uroporphyrinogen decarboxylase, chloroplastic OS=Nicotiana tabacum GN=DCUP PE=1 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.393e-125 Identity = 219/256 (85.55%), Postives = 245/256 (95.70%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 IKGKGPVIFDP+ T A+V++VREF PE+SVPYVG+ALTILR+EVNN+AAVLGFVGAPFTLASYVVEGGSSK+F+KIKRLAF++PKVLHALL+KF TSMAKY++YQAD+GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVD+VK THP+L LILYASGSGGLLERL LTGVDVVSLDWTVDMA+GRRRLGP+VA+QGNVDPG LFGSK+FITNRINDTV+KAG+ KHILNLGHGIKVGTPEEN AHFFE+AK +RY Sbjct: 136 IKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKGLRY 391
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP2_ORYSJ (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0337600 PE=3 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 7.908e-121 Identity = 213/256 (83.20%), Postives = 237/256 (92.58%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 +KGKGPVIFDP+ T A V++VREF PEE VPYVG+AL ILREEVNNEAAVLGFVGAPFTLASY VEGGSSK+FSKIK++AFS+P++LH LL+KFTTSMA Y++YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVD+VK+THP+L LILYASGSGGLLERL LTGVDVVSLDWTVDMAEGR+RLG ++AVQGNVDPG LFGSK+FI+ RI DTV+KAG H+LNLGHGIKVGTPEENVAHFFEVAK IRY Sbjct: 135 VKGKGPVIFDPLRTAAAVNEVREFVPEEWVPYVGQALNILREEVNNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKKMAFSEPEILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPELPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFISKRIFDTVQKAGNSGHVLNLGHGIKVGTPEENVAHFFEVAKGIRY 390
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP2_ARATH (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=At2g40490 PE=1 SV=1) HSP 1 Score: 432.18 bits (1110), Expect = 1.762e-120 Identity = 215/256 (83.98%), Postives = 238/256 (92.97%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 +KGKGP+IF+P + A+V QVREF PEESVPYVG+AL LR EVNNEAAVLGFVGAPFTL+SYV+EGGSSK+F++IKRLAFSQPKVLHALL+KFTTSM Y++YQAD+GAQAVQIFDSWATELSPVDFEEFSLPYLKQIV+ VKQTHP+L LILYASGSGGLLERLA TGVDVVSLDWTVDMAEGR RLG D+AVQGNVDPG LFGSK+FIT+RI+DTV+KAGR KHILNLGHGIKVGTPEENVAHFFEVA+ IRY Sbjct: 139 VKGKGPIIFNPPQSAADVAQVREFVPEESVPYVGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHALLQKFTTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNLPLILYASGSGGLLERLARTGVDVVSLDWTVDMAEGRDRLGRDIAVQGNVDPGVLFGSKEFITSRIHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQEIRY 394
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_HORVU (Uroporphyrinogen decarboxylase (Fragment) OS=Hordeum vulgare GN=DCUP PE=2 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 1.491e-119 Identity = 211/256 (82.42%), Postives = 234/256 (91.41%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 +KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL +LR EV NEAAVLGFVGAPFTLASY VEGGSSK+FSKIKR+AF++P +LH LL+KFTTSMA Y++YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVD+VK+THPDL LILYASGSGGLLERL LTGVDVVSLDWTVDMAEGR+RLG ++AVQGNVDPG LFGSK+FIT RI DTV+KAG H+LNLGHGIKVGTPEENVAHFFEVAK IRY Sbjct: 75 VKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNLLRGEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKRMAFAEPAILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPDLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFITKRIYDTVQKAGSQGHVLNLGHGIKVGTPEENVAHFFEVAKGIRY 330
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_MAIZE (Uroporphyrinogen decarboxylase, chloroplastic OS=Zea mays GN=LES22 PE=2 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 6.266e-118 Identity = 208/256 (81.25%), Postives = 232/256 (90.62%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 +KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL ILR+EV NEAAVLGFVGAPFTLASY VEGGSSK+F+ IK++AFS+P +LH LL+KFTTSMA Y++YQADNGAQAVQIFDSWATELSP DFEEFSLPYLKQIVD+V++THPDL LILYASGSGGLLERL LTGVDVVSLDWTVDMAEGR+RLG + AVQGNVDPG LFGSK+FIT RI DTV+KAG H+LNLGHGIKVGTPEENVAHFFEVAK IRY Sbjct: 138 VKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNILRQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKKMAFSEPAILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVRETHPDLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRKRLGSNTAVQGNVDPGVLFGSKEFITRRIYDTVQKAGNVGHVLNLGHGIKVGTPEENVAHFFEVAKGIRY 393
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_CYAA5 (Uroporphyrinogen decarboxylase OS=Cyanothece sp. (strain ATCC 51142) GN=hemE PE=3 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.322e-88 Identity = 156/254 (61.42%), Postives = 199/254 (78.35%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 ++ KGPVI PI T +VD +R DPEES+P++ L LR+EV N++ VLGFVG+P+TLA+Y +EG SSK+++ IK +AFSQP++LH+ L K ++A YV+YQ D GAQ VQ+FDSWA +LSP D+E F+LPY +Q+V VK+THPD LILY SGS G+LER+ +GVD+VS+DWTVDMAE R+RLG D+ VQGN+DPG LFGS+DFI RI DTVRKAGR HILNLGHG+ VGTPE+NV FFE AK + Sbjct: 93 VESKGPVIDPPIRTKEQVDNLRPLDPEESLPFIKTILQSLRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKSMAFSQPEILHSFLSKIADAIAIYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKETHPDTPLILYISGSAGVLERMGQSGVDIVSVDWTVDMAEARQRLGRDMKVQGNIDPGVLFGSQDFIKARILDTVRKAGRGGHILNLGHGVLVGTPEDNVRCFFETAKQV 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNP2 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemE PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 2.174e-86 Identity = 151/255 (59.22%), Postives = 196/255 (76.86%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 765 I+ KGP+I +PI T A+VD + FDP ES+P++ L LR+EV N + VLGFVGAP+TLA+Y +EG SSK+++ IK +AFS+P VLH+ L K ++A YV YQ + GAQ +Q+FDSWA +LSP D++ F+LPY K++VD VK +PD LILY SGS G+LER+ +GVD+VS+DWTVDMA+ R+RLG D+ VQGN+DPG LFGS+DFI RI DTVRKAG W HILNLGHG+ VGTPE+NV FFE K ++ Sbjct: 93 IESKGPIIENPIRTQAQVDAMTPFDPAESLPFIKTILGTLRQEVGNASTVLGFVGAPWTLAAYAIEGKSSKNYAIIKNMAFSEPAVLHSFLGKIADAIADYVCYQIECGAQVIQMFDSWAGQLSPQDYDMFALPYQKRVVDKVKAKYPDFPLILYISGSAGVLERMGKSGVDIVSVDWTVDMADARQRLGKDMKVQGNIDPGVLFGSQDFIKARIIDTVRKAGNWGHILNLGHGVLVGTPEDNVRFFFETCKNVQ 347
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_CYAP7 (Uroporphyrinogen decarboxylase OS=Cyanothece sp. (strain PCC 7424) GN=hemE PE=3 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.409e-85 Identity = 150/252 (59.52%), Postives = 194/252 (76.98%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 756 I+ KGP+I PI T ++D + FDP+++VP+V L LR+EV N++ VLGFVGAP+TLA+Y VEG SSK +S IK +AFS+P +LH LL K +A YV+YQ D GAQ VQ+FDSWA +L+P D++ F+LPY +Q+V VK+THPD LILY SGS G+LER+ +GVD++S+DWTVDMAE R+RLG ++ VQGN+DPG LFGS+ FI +RI DT+RKAG HILNLGHG+ VGTPE+NV FFE AK Sbjct: 93 IESKGPIIDPPIRTQQQIDHLHPFDPDQTVPFVKTILKTLRQEVGNQSTVLGFVGAPWTLAAYAVEGKSSKTYSIIKSMAFSEPAILHQLLSKLADMVASYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQQVVRQVKETHPDTPLILYISGSAGVLERMGKSGVDMISVDWTVDMAEARQRLGKEMKVQGNIDPGVLFGSQSFIRDRIVDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAK 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SYNY3 (Uroporphyrinogen decarboxylase OS=Synechocystis sp. (strain PCC 6803) GN=hemE PE=3 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.840e-85 Identity = 149/254 (58.66%), Postives = 195/254 (76.77%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 762 I+ KGP+I PI T A+VDQ+ DPE S+P++ L LR+EV N++ VLGFVGAP+TLA+Y +EG SSK + IK++AFS+P +LH+ L K ++A YV+YQ D GAQ VQ+FDSWA +LSP D++ F+LPY +++V VK+ HPD LILY SGS G+LER+ +GVD+VS+DWTVDMA+ R+RLG ++ VQGN+DPG LFGS+DFI RI DTVRKAG+ HI NLGHG+ VGTPE+NV FFE AK + Sbjct: 93 IESKGPIIDPPIRTQAQVDQLHALDPESSLPFIKTILGTLRKEVGNQSTVLGFVGAPWTLAAYAIEGKSSKDYKVIKQMAFSEPAILHSFLDKIAEAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYDTFALPYQQKVVKLVKEIHPDTPLILYISGSAGILERMGKSGVDIVSVDWTVDMADARQRLGKEMKVQGNMDPGVLFGSQDFIKERILDTVRKAGQGGHIFNLGHGVLVGTPEDNVRFFFETAKQV 346
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_MICAN (Uroporphyrinogen decarboxylase OS=Microcystis aeruginosa (strain NIES-843) GN=hemE PE=3 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.193e-84 Identity = 149/256 (58.20%), Postives = 192/256 (75.00%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 768 I+ KGP+I PI T A+VDQ+ DP++S+P++ L LR+EV N++ VLGFVGAP+TLA+Y VEG SK +S IK +AFS+P VLH L K +A YV+YQ D GAQ VQ+FDSWA +L+P D++ F+LPY +++V VK+THPD LILY SGS G+LER+ +GVD++S+DWTVD+AE R+RLG + VQGN+DPG LFGS+ FI RI DT+RKAG HILNLGHG+ VGTPE+NV FFE AK Y Sbjct: 93 IESKGPIIDSPIRTQAQVDQLNPLDPDQSLPFIKTILKTLRQEVGNKSTVLGFVGAPWTLAAYAVEGKGSKSYSVIKGMAFSEPSVLHQFLDKLADMIATYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQKVVRLVKETHPDTPLILYISGSAGVLERMGKSGVDIISVDWTVDLAEARQRLGKAMMVQGNIDPGVLFGSQSFIRERIIDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAKQFSY 348 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |