CX043422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY132_ARATH (Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 7.143e-40 Identity = 65/76 (85.53%), Postives = 74/76 (97.37%), Query Frame = -1 Query: 511 TIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 738 TID LIETGNSEQIFQKAIQEQGRGQV++TL EIQERHDAV+++EKKLLDLQQI++DMAVLV+AQGE+LDNIESQV Sbjct: 174 TIDELIETGNSEQIFQKAIQEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFLDMAVLVDAQGEMLDNIESQV 249 HSP 2 Score: 53.1434 bits (126), Expect = 7.143e-40 Identity = 28/61 (45.90%), Postives = 35/61 (57.38%), Query Frame = -3 Query: 242 VLMEMSVQVSNAVTNVQSGTTALQSAKKHQKSSRKWMCXXXXXXXXXXXXXXXXXIKPWKS 424 +L + QVS+AV +VQSG TALQ AK QK+SRKWMC +KPWK+ Sbjct: 241 MLDNIESQVSSAVDHVQSGNTALQRAKSLQKNSRKWMCIAIIILLIVVAVIVVGVLKPWKN 301
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY131_ARATH (Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.052e-34 Identity = 58/75 (77.33%), Postives = 72/75 (96.00%), Query Frame = -1 Query: 511 IDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 735 ID LIETG+SEQIFQKAI+EQGRGQ+++TL EIQERHDAV+++EKKLLDLQQ+++DMAVLV+AQGE+LDNIE+ V Sbjct: 176 IDRLIETGDSEQIFQKAIREQGRGQIMDTLAEIQERHDAVRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMV 250 HSP 2 Score: 45.0542 bits (105), Expect = 1.052e-34 Identity = 24/55 (43.64%), Postives = 27/55 (49.09%), Query Frame = -3 Query: 236 VSNAVTNVQSGTTALQSAKKHQKSSRKWMCXXXXXXXXXXXXXXXXXIKPWKSGN 400 VS+AV +VQSG L A K QKSSRKWMC +KPW N Sbjct: 250 VSSAVDHVQSGNNQLTKAVKSQKSSRKWMCIAILILLIIIIITVISVLKPWTQKN 304
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY125_ARATH (Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.694e-29 Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = -1 Query: 511 TIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 738 TID+LI +G SE QKAIQEQGRGQ+L+T+ EIQERHDAVKEIEK LL+L Q+++DMA LVEAQG+ L+NIES V Sbjct: 168 TIDNLIASGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIESHV 243 HSP 2 Score: 36.965 bits (84), Expect = 9.694e-29 Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = -3 Query: 311 LMEMSVQVSNAVTNVQSGTTALQSAKKHQKSSRKWMC 421 L + V+ A + V+ GT LQ A+++QKSSRKW C Sbjct: 236 LNNIESHVAKASSFVRRGTDQLQDAREYQKSSRKWTC 272
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY124_ARATH (Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.997e-28 Identity = 50/76 (65.79%), Postives = 65/76 (85.53%), Query Frame = -1 Query: 511 TIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 738 TI++LI +G SE QKAIQEQGRGQ+L+T+ EIQERHDAVKEIEK L++L Q+++DMA LVE+QG+ L++IES V Sbjct: 173 TIENLISSGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNDIESHV 248 HSP 2 Score: 38.891 bits (89), Expect = 7.997e-28 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = -3 Query: 311 LMEMSVQVSNAVTNVQSGTTALQSAKKHQKSSRKWMC 421 L ++ VS A + V+ GT LQ A+++QKSSRKW C Sbjct: 241 LNDIESHVSKASSFVRRGTDQLQDAREYQKSSRKWTC 277
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY121_ARATH (Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 5.054e-27 Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = -1 Query: 511 TIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 738 T+D LI TG SE+ QKAIQEQGRG+VL+T+ EIQERHDAVK+IEK L +L Q+++DMAVLVE QG LD+IES V Sbjct: 184 TLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHV 259 HSP 2 Score: 36.5798 bits (83), Expect = 5.054e-27 Identity = 17/62 (27.42%), Postives = 30/62 (48.39%), Query Frame = -3 Query: 236 LMEMSVQVSNAVTNVQSGTTALQSAKKHQKSSRKWMCXXXXXXXXXXXXXXXXXIKPWKSGN 421 L ++ V A + ++ GT LQ+A+ +QK++RKW C +KPW + + Sbjct: 252 LDDIESHVGRASSFIRGGTDQLQTARVYQKNTRKWTCIAIIILIIIITVVVLAVLKPWNNSS 313
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY122_ARATH (Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.846e-25 Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = -1 Query: 511 TIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 738 T++ LI TG SE QKAIQEQGRG++L+T+ EIQERHDAVK+IEK L +L Q+++DMAVLVE QG LD+IE V Sbjct: 183 TLERLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDIEKSLNELHQVFLDMAVLVEHQGAQLDDIEGNV 258 HSP 2 Score: 33.4982 bits (75), Expect = 9.846e-25 Identity = 18/60 (30.00%), Postives = 28/60 (46.67%), Query Frame = -3 Query: 242 LMEMSVQVSNAVTNVQSGTTALQSAKKHQKSSRKWMCXXXXXXXXXXXXXXXXXIKPWKS 421 L ++ V A + V+SG L A+ +QK++RKW C +KPW+S Sbjct: 251 LDDIEGNVKRANSLVRSGADRLVKARFYQKNTRKWTCFAILLLLIIVVLIVVFTVKPWES 310
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY123_ARATH (Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.228e-22 Identity = 50/76 (65.79%), Postives = 64/76 (84.21%), Query Frame = -1 Query: 511 TIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 738 T++ LI +G SE+ QKAIQEQGRGQV++TL EIQERHD VKEIE+ LL+L Q+++DMA LVEAQG +L++IES V Sbjct: 176 TVEKLISSGESERFLQKAIQEQGRGQVMDTLSEIQERHDTVKEIERSLLELHQVFLDMAALVEAQGNMLNDIESNV 251
BLAST of CX043422 vs. ExPASy Swiss-Prot
Match: SY111_ARATH (Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana GN=KN PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.607e-21 Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = -1 Query: 511 LIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILDNIESQV 726 + + E+ +AIQE G+G+VL T+ EIQ+R+DA KEIEK LL+L Q+++DMAV+VE+QGE +D IE V Sbjct: 186 ITDNAGGEEFLTRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMVESQGEQMDEIEHHV 257 HSP 2 Score: 38.1206 bits (87), Expect = 7.607e-21 Identity = 17/35 (48.57%), Postives = 22/35 (62.86%), Query Frame = -3 Query: 311 EMSVQVSNAVTNVQSGTTALQSAKKHQKSSRKWMC 415 E+ V NA V G L++AK HQ++SRKWMC Sbjct: 252 EIEHHVINASHYVADGANELKTAKSHQRNSRKWMC 286 The following BLAST results are available for this feature:
BLAST of CX043422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043422 ID=CX043422; Name=CX043422; organism=Citrus sinensis; type=EST; length=759bpback to top |